diff --git a/docs/usage.md b/docs/usage.md index aac663e7..66c17d79 100644 --- a/docs/usage.md +++ b/docs/usage.md @@ -314,6 +314,10 @@ It is unclear whether ganon is suitable for running long reads - during testing Therefore currently nf-core/taxprofiler does not run ganon on data specified as being sequenced with `OXFORD_NANOPORE` in the input samplesheet. +##### kmcp + +KMCP is only suitable for short-read metagenomic profiling, with much lower sensitivity on long-read datasets. Therefore, nf-core/taxprofiler does not currently run kmcp on data specified as being sequenced with `OXFORD_NANOPORE` in the input samplesheet. + #### Post Processing ##### Visualisation