Introduction to nf-core
-
+
nf-core YouTube channel
@@ -117,7 +117,7 @@ let eventPreviewPast = eventPreview
Our weekly series of short talks.
-
+
diff --git a/sites/main-site/src/components/pipeline/PipelineSidebar.astro b/sites/main-site/src/components/pipeline/PipelineSidebar.astro
index 86e7eae191..bf29b46465 100644
--- a/sites/main-site/src/components/pipeline/PipelineSidebar.astro
+++ b/sites/main-site/src/components/pipeline/PipelineSidebar.astro
@@ -124,7 +124,7 @@ const id = video?.replace('https://www.youtube.com/watch?v=', '').replace('https
{
id && (
-
+
)
}
diff --git a/sites/main-site/src/content/blog/2024/fastquorum_intro.mdx b/sites/main-site/src/content/blog/2024/fastquorum_intro.mdx
index ad74f4c5a0..1ccdae5f1e 100644
--- a/sites/main-site/src/content/blog/2024/fastquorum_intro.mdx
+++ b/sites/main-site/src/content/blog/2024/fastquorum_intro.mdx
@@ -226,7 +226,7 @@ Both [Fulcrum Genomics][fulcrum-genomics-link] and its [current and past team me
If you want to hear this all over again, please check out the recent talk announcing the first release of this pipeline at the Nextflow Summit in Boston (2024):
-
+
[nf-core-fastquorum-link]: https://nf-co.re/fastquorum
[fgbio-best-practices-link]: https://github.com/fulcrumgenomics/fgbio/blob/main/docs/best-practice-consensus-pipeline.md
diff --git a/sites/main-site/src/content/blog/2024/sarek_paper.mdx b/sites/main-site/src/content/blog/2024/sarek_paper.mdx
index c9f1d8d67c..915330ff85 100644
--- a/sites/main-site/src/content/blog/2024/sarek_paper.mdx
+++ b/sites/main-site/src/content/blog/2024/sarek_paper.mdx
@@ -102,4 +102,4 @@ and you’re welcome to join #sarek_dev if you really want to get involved.
If you want to know more, here are some recent talks detailing the changes and development journey:
-
+
diff --git a/sites/main-site/src/content/blog/2024/tools-3_0_0.mdx b/sites/main-site/src/content/blog/2024/tools-3_0_0.mdx
index 7be18dd9c2..2b78002701 100644
--- a/sites/main-site/src/content/blog/2024/tools-3_0_0.mdx
+++ b/sites/main-site/src/content/blog/2024/tools-3_0_0.mdx
@@ -37,7 +37,7 @@ We promise, it's worth it! :pray:
- For nf-core pipelines, certain core features (e.g., documentation, CI tests) remain mandatory, but you still have significant customisation flexibility.
- New Text User Interface (TUI) for pipeline creation
- A guided interface helps you through the process when running `nf-core pipelines create{:bash}` (don't worry - you can still use the CLI by providing all values as parameters).
-
+
- Switch to [nf-schema](https://nextflow-io.github.io/nf-schema/latest/) for input validation
- Replaces its predecessor nf-validation as a standard plugin in the template
- CI tests now use the nf-core tools version matching the pipeline's template version
@@ -179,7 +179,7 @@ To prepare for upcoming Nextflow syntax depreciations, for loops and try/catch b
## Video walk-through
-
+
## `README.md`
diff --git a/sites/main-site/src/content/events/2023/hackathon-november-2023.mdx b/sites/main-site/src/content/events/2023/hackathon-november-2023.mdx
index 02270b5d05..5f9df2f612 100644
--- a/sites/main-site/src/content/events/2023/hackathon-november-2023.mdx
+++ b/sites/main-site/src/content/events/2023/hackathon-november-2023.mdx
@@ -52,7 +52,7 @@ More information about this venue can be found on the [Nextflow Summit website](
-
+
# Schedule
diff --git a/sites/main-site/src/content/events/2023/hackathon-october-2023.mdx b/sites/main-site/src/content/events/2023/hackathon-october-2023.mdx
index 30ce529f44..e1a4010e80 100644
--- a/sites/main-site/src/content/events/2023/hackathon-october-2023.mdx
+++ b/sites/main-site/src/content/events/2023/hackathon-october-2023.mdx
@@ -67,7 +67,7 @@ with links that you can use to subscribe / add to your personal calendar.
The in-person hackathon will be taking place at [Hotel SB Glow](https://goo.gl/maps/6uKCKkbciLAR5qgSA).
More information about this venue can be found the the [Nextflow Summit website](https://summit.nextflow.io/).
-
+
## Online: Gather.town
diff --git a/sites/main-site/src/pages/events/[...event].astro b/sites/main-site/src/pages/events/[...event].astro
index 23d1c7ac6e..abe12a6b0e 100644
--- a/sites/main-site/src/pages/events/[...event].astro
+++ b/sites/main-site/src/pages/events/[...event].astro
@@ -44,10 +44,10 @@ const ids = video?.map(
// Check if maxres thumbnail is available
let posters = await Promise.all(
Array.from(ids || []).map(async (id) => {
- const maxresPoster = `https://img.youtube.com/vi/${id}/maxresdefault.jpg`;
+ const maxresPoster = `https://i.ytimg.com/vi/${id}/maxresdefault.jpg`;
const response = await fetch(maxresPoster);
if (response.status === 404) {
- return `https://img.youtube.com/vi/${id}/hqdefault.jpg`;
+ return `https://i.ytimg.com/vi/${id}/hqdefault.jpg`;
}
return maxresPoster;
}),
diff --git a/sites/modules-subworkflows/astro.config.mjs b/sites/modules-subworkflows/astro.config.mjs
index fb43e35ea4..dfa1337fa4 100644
--- a/sites/modules-subworkflows/astro.config.mjs
+++ b/sites/modules-subworkflows/astro.config.mjs
@@ -87,7 +87,7 @@ export default defineConfig({
preprocessorOptions: {
scss: {
api: 'modern-compiler',
- silenceDeprecations: ['legacy-js-api'],
+ silenceDeprecations: ['legacy-js-api','mixed-decls','color-functions'],
},
},
},
diff --git a/sites/pipeline-results/astro.config.mjs b/sites/pipeline-results/astro.config.mjs
index 26cb137fe9..be41ae39cc 100644
--- a/sites/pipeline-results/astro.config.mjs
+++ b/sites/pipeline-results/astro.config.mjs
@@ -95,7 +95,7 @@ export default defineConfig({
preprocessorOptions: {
scss: {
api: 'modern-compiler',
- silenceDeprecations: ['legacy-js-api'],
+ silenceDeprecations: ['legacy-js-api','mixed-decls','color-functions'],
},
},
},
diff --git a/sites/pipelines/astro.config.mjs b/sites/pipelines/astro.config.mjs
index c39da4b4a5..dd51c4a8f5 100644
--- a/sites/pipelines/astro.config.mjs
+++ b/sites/pipelines/astro.config.mjs
@@ -103,7 +103,7 @@ export default defineConfig({
preprocessorOptions: {
scss: {
api: 'modern-compiler',
- silenceDeprecations: ['legacy-js-api'],
+ silenceDeprecations: ['legacy-js-api','mixed-decls','color-functions'],
},
},
},