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setup.py
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setup.py
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from setuptools import setup, find_packages
with open('README.md') as f:
readme = f.read()
with open('LICENSE') as f:
license = f.read()
setup(
name='basenji',
version='0.0.1',
description='Sequential regulatory activity machine learning',
long_description=readme,
author='David Kelley',
author_email='[email protected]',
url='https://github.com/calico/basenji',
license=license,
packages=find_packages(exclude=('tests', 'docs')),
install_requires=[
'h5py', 'joblib', 'matplotlib', 'networkx', 'numpy', 'pandas', 'pyBigWig',
'pysam', 'scipy', 'seaborn', 'scikit-learn', 'statsmodels', 'tensorflow'
])
# fetch
# google-cloud-bigquery
# pip install dash dash-renderer dash-html-components dash-core-components dash-table-experiments plotly