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species list

Marta Bleda edited this page Mar 3, 2015 · 2 revisions
species Name Scientific name Assembly
hsapiens human Homo sapiens GRCh37.p13
mmusculus mouse Mus musculus GRCm38.p2
rnorvegicus rat Rattus norvegicus Rnor_5.0
ptroglodytes chimp Pan troglodytes CHIMP2.1.4
ggorilla gorilla Gorilla gorilla gorGor3.1
pabelii orangutan Pongo abelii PPYG2
mmulatta macaque Macaca mulatta MMUL 1.0
sscrofa pig Sus scrofa Sscrofa10.2
cfamiliaris dog Canis familiaris CanFam 3.1
ecaballus horse Equus caballus Equ Cab 2
ocuniculus rabbit Oryctolagus cuniculus OryCun2.0
ggallus chicken Gallus gallus Galgal4
btaurus cow Bos taurus UMD3.1
fcatus cat Felis catus Felis_catus_6.2
drerio zebrafish Danio rerio Zv9
cintestinalis Ciona intestinalis KH
dmelanogaster fruitfly Drosophila melanogaster BDGP 5
dsimulans Drosophila simulans dsim_caf1
dyakuba Drosophila yakuba dyak_caf1
agambiae mosquito Anopheles gambiae AgamP4
celegans worm Caenorhabditis elegans WS235
scerevisiae yeast Saccharomyces cerevisiae R64-1-1
spombe Schizosaccharomyces pombe ASM294v2
afumigatus Aspergillus fumigatus TIGR
aniger Aspergillus niger DSM
anidulans Aspergillus nidulans ASM1142v1
aoryzae Aspergillus oryzae NITE
pfalciparum malaria parasite Plasmodium falciparum 3D7
lmajor Plasmodium falciparum ASM276v1
athaliana Arabidopsis thaliana TAIR10
alyrata Arabidopsis lyrata v.1.0
bdistachyon Brachypodium distachyon v1.0
osativa Oryza sativa Indica ASM465v1
gmax Glycine max V1.0
vvinifera Vitis vinifera IGGP_12x
zmays Zea mays AGPv3