From 42c02aec9057ceb3e961e7df24627773f8bd76c0 Mon Sep 17 00:00:00 2001
From: AaronBrennan1 <68754265+AaronBrennan1@users.noreply.github.com>
Date: Tue, 5 Nov 2024 02:38:22 +0000
Subject: [PATCH] Delete .github/workflows/testAll-CodeCov-README.md

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-
-# TestAll and Code Cov CI - GitHub Actions Workflow
-
-This repository contains the **Code Cov CI** GitHub Actions workflow, which automates the process of running MATLAB tests and generating code coverage reports using Codecov. The workflow is triggered on pushes and pull requests to the `develop` branch.
-
-## Table of Contents
-
-- [Overview](#overview)
-- [Prerequisites](#prerequisites)
-- [Setup Instructions](#setup-instructions)
-- [Workflow Breakdown](#workflow-breakdown)
-  - [Trigger Configuration](#trigger-configuration)
-  - [Jobs Definition](#jobs-definition)
-  - [Steps Breakdown](#steps-breakdown)
-- [Project Structure](#project-structure)
-- [Benefits](#benefits)
-- [License](#license)
-
-## Overview
-
-The **Code Cov CI** workflow automates testing and code coverage. It ensures that code changes are tested and that code coverage metrics are updated automatically.
-
-## Prerequisites
-
-- **MATLAB R2022a**: The workflow uses MATLAB R2022a. Ensure your code is compatible with this version.
-- **Codecov Account**: Sign up for a [Codecov](https://codecov.io/) account to access code coverage reports.
-- **Codecov Token**: Obtain a `CODECOV_TOKEN` from Codecov for authentication.
-
-## Setup Instructions
-
-1. **Clone the Repository** (if not already):
-
-   ```bash
-   git clone https://github.com/opencobra/cobratoolbox.git   
-   ```
-
-2. **Add the Workflow File**:
-
-   - Save the provided workflow YAML file as `.github/workflows/codecov.yml` in your repository.
-
-3. **Store Codecov Token**:
-
-   - In the repository, go to **Settings** > **Secrets and variables** > **Actions**.
-   - Click on **New repository secret**.
-   - Add `CODECOV_TOKEN` as the name and paste your Codecov token as the value.
-
-4. **Organize Your Project**:
-
-   - **Source Code**: MATLAB source code in the `src` directory, which it aready is.
-   - **Tests**: Place test files in the `test` directory. Ensure `testAll.m` is in this directory.
-
-5. **Push Changes**:
-
-   ```bash
-   git add .
-   git commit -m "Add Code Cov CI workflow"
-   git push origin develop
-   ```
-
-## Workflow Breakdown
-
-### Trigger Configuration
-
-The workflow is triggered on push events and pull requests to the `develop` branch.
-
-```yaml
-on:
-  push:
-    branches: [develop]
-  pull_request:
-    branches: [develop]
-```
-
-### Jobs Definition
-
-The workflow defines a job named `test` that runs on the latest Ubuntu environment.
-
-```yaml
-jobs:
-  test:
-    runs-on: ubuntu-latest
-```
-
-### Steps Breakdown
-
-1. **Checkout Repository**
-
-   Checks out your repository code so the workflow can access it.
-
-   ```yaml
-   - uses: actions/checkout@v3
-   ```
-
-2. **Set Up MATLAB**
-
-   Installs MATLAB R2022a on the runner to execute MATLAB scripts and functions.
-
-   ```yaml
-   - name: Set up MATLAB
-     uses: matlab-actions/setup-matlab@v1
-     with:
-       release: R2022a
-   ```
-
-3. **Run MATLAB Tests and Generate Coverage**
-
-   Executes the specified MATLAB test and generates a code coverage report in Cobertura XML format.
-
-   ```yaml
-   - name: Run MATLAB tests and generate coverage
-     run: |
-       matlab -batch "import matlab.unittest.TestRunner; \
-       import matlab.unittest.plugins.CodeCoveragePlugin; \
-       import matlab.unittest.plugins.codecoverage.CoberturaFormat; \
-       runner = TestRunner.withTextOutput; \
-       runner.addPlugin(CodeCoveragePlugin.forFolder('src', 'Producing', CoberturaFormat('coverage.xml'))); \
-       results = runner.run(testsuite('test/testAll.m')); \
-       assertSuccess(results);"
-   ```
-
-4. **Upload Coverage to Codecov**
-
-   Uploads the generated code coverage report to Codecov for analysis.
-
-   ```yaml
-   - name: Upload coverage to Codecov
-     run: |
-       bash <(curl -s https://codecov.io/bash) -f coverage.xml -F matlab
-     env:
-       CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}
-   ```
-
-
-## Project Structure
-
-Organize your project as follows:
-
-```
-your-repository/
-├── .github/
-│   └── workflows/
-│       └── codecov.yml
-├── src/
-│   └── (MATLAB source code)
-├── test/
-│   └── testAll.m
-├
-└── (Other project files)
-```
-
-