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cool_bioinfo_databases.Rmd
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cool_bioinfo_databases.Rmd
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---
title: "Bioinformatics Databases"
author: "Payal Banerjee"
date: "12/05/2020"
output: html_document
---
# Bioinformatics Databases
[//]: # Create Markdown tables using this link - https://www.tablesgenerator.com/markdown_tables
[//]: # Always keep a line in between table header and table other wise markdown doesn't render properly
Table: **Single Cell Databases**
| Name | Description | Link |
|------------------ |------------------------------------------------------------- |------------------------------------ |
| descartes | Single cell atlas | https://descartes.brotmanbaty.org/ |
| PanglaoDB | Single cell RNA sequencing experiments from mouse and human | https://panglaodb.se/ |
| CancerSEA | Functional states of cancer cells at single-cell resolution | |
| Human Cell Atlas | Reference maps of all human cells | https://www.humancellatlas.org/ |
| Mouse Cell Atlas | Reference maps of mouse cells | http://bis.zju.edu.cn/MCA/ |
| DropViz | Exploring the Mouse Brain through Single Cell Expression Profiles | http://dropviz.org/ |
| Single-Cell Signature Explorer | Single-Cell Signature Explorer is a package of four softwares dedicated to high throughput signature exploration in single-cell RNAseq analysis. | https://sites.google.com/site/fredsoftwares/products/single-cell-signature-explorer |
Table: **RNA Seq Databases**
| Name | Description | Link |
|------------------------- |------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |------------------------------- |
| The Human Protein Atals | Maps all the human proteins in cells, tissues and organs using an integration of various omics technologies, including antibody-based imaging, mass spectrometry-based proteomics, transcriptomics and systems biology | https://www.proteinatlas.org/ |
Table : **RNA Seq Tutorials**
Table: **Single Cell Seq Tutorials**
Table: **RNA seq Downstram analysis tutorials**