From 77c9d0199181d986f8159823ef8556fd6ba0ede3 Mon Sep 17 00:00:00 2001
From: Rebecca C <57101783+rebecca-c21@users.noreply.github.com>
Date: Fri, 16 Oct 2020 18:01:44 -0400
Subject: [PATCH 1/9] get_databases() function
---
.idea/.gitignore | 0
.../inspectionProfiles/profiles_settings.xml | 6 ++++
.idea/misc.xml | 7 ++++
.idea/modules.xml | 8 +++++
.idea/singlecellvr.iml | 12 +++++++
.idea/vcs.xml | 6 ++++
.idea/workspace.xml | 32 +++++++++++++++++++
7 files changed, 71 insertions(+)
create mode 100644 .idea/.gitignore
create mode 100644 .idea/inspectionProfiles/profiles_settings.xml
create mode 100644 .idea/misc.xml
create mode 100644 .idea/modules.xml
create mode 100644 .idea/singlecellvr.iml
create mode 100644 .idea/vcs.xml
create mode 100644 .idea/workspace.xml
diff --git a/.idea/.gitignore b/.idea/.gitignore
new file mode 100644
index 0000000..e69de29
diff --git a/.idea/inspectionProfiles/profiles_settings.xml b/.idea/inspectionProfiles/profiles_settings.xml
new file mode 100644
index 0000000..105ce2d
--- /dev/null
+++ b/.idea/inspectionProfiles/profiles_settings.xml
@@ -0,0 +1,6 @@
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diff --git a/.idea/misc.xml b/.idea/misc.xml
new file mode 100644
index 0000000..7a85af6
--- /dev/null
+++ b/.idea/misc.xml
@@ -0,0 +1,7 @@
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diff --git a/.idea/modules.xml b/.idea/modules.xml
new file mode 100644
index 0000000..85d62a7
--- /dev/null
+++ b/.idea/modules.xml
@@ -0,0 +1,8 @@
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diff --git a/.idea/singlecellvr.iml b/.idea/singlecellvr.iml
new file mode 100644
index 0000000..8b8c395
--- /dev/null
+++ b/.idea/singlecellvr.iml
@@ -0,0 +1,12 @@
+
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diff --git a/.idea/vcs.xml b/.idea/vcs.xml
new file mode 100644
index 0000000..94a25f7
--- /dev/null
+++ b/.idea/vcs.xml
@@ -0,0 +1,6 @@
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diff --git a/.idea/workspace.xml b/.idea/workspace.xml
new file mode 100644
index 0000000..5fa8971
--- /dev/null
+++ b/.idea/workspace.xml
@@ -0,0 +1,32 @@
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+ 1602885565744
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+ 1602885565744
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\ No newline at end of file
From 0f6cf233bf4d846ddf2c44f52b7c743a767d66d4 Mon Sep 17 00:00:00 2001
From: Rebecca C <57101783+rebecca-c21@users.noreply.github.com>
Date: Fri, 16 Oct 2020 18:13:12 -0400
Subject: [PATCH 2/9] get_databases() function
imported glob module as well
---
dash_app/apps/dash-singlecell-vr/app.py | 14 +++++++++++++-
1 file changed, 13 insertions(+), 1 deletion(-)
diff --git a/dash_app/apps/dash-singlecell-vr/app.py b/dash_app/apps/dash-singlecell-vr/app.py
index b447cae..f2c7fe4 100644
--- a/dash_app/apps/dash-singlecell-vr/app.py
+++ b/dash_app/apps/dash-singlecell-vr/app.py
@@ -13,7 +13,7 @@
import base64
import uuid
import qrcode
-
+import glob
# Load data
APP_PATH = str(pathlib.Path(__file__).parent.resolve())
@@ -58,6 +58,18 @@ def serve_static(uid):
def show_help():
return render_template('help.html')
+@app.server.route('/databases')
+def get_databases():
+ databases = sorted(glob.glob("/databases/*.anndata'"))
+ return databases
+ list_databases = []
+ for i in range(adata.shape[0]):
+ dict_datab = dict()
+ dict_datab['id'] = adata.obs_names[i]
+ dict_datab['description'] = adata.obs['description'].tolist()[i]
+ list_databases.append(dict_datab)
+ return jsonify(list_databases)
+
app.title = "SingleCellVR"
# App layout
From 708fdb1f43cd26cc3406959cb23ae169f838b7e9 Mon Sep 17 00:00:00 2001
From: rebeccacombs <71912974+rebeccacombs@users.noreply.github.com>
Date: Fri, 16 Oct 2020 18:15:20 -0400
Subject: [PATCH 3/9] Delete workspace.xml
---
.idea/workspace.xml | 32 --------------------------------
1 file changed, 32 deletions(-)
delete mode 100644 .idea/workspace.xml
diff --git a/.idea/workspace.xml b/.idea/workspace.xml
deleted file mode 100644
index 5fa8971..0000000
--- a/.idea/workspace.xml
+++ /dev/null
@@ -1,32 +0,0 @@
-
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\ No newline at end of file
From d50083d5d1e74b7a9bd1afed05d98142a9103ab5 Mon Sep 17 00:00:00 2001
From: rebeccacombs <71912974+rebeccacombs@users.noreply.github.com>
Date: Fri, 16 Oct 2020 18:15:28 -0400
Subject: [PATCH 4/9] Delete profiles_settings.xml
---
.idea/inspectionProfiles/profiles_settings.xml | 6 ------
1 file changed, 6 deletions(-)
delete mode 100644 .idea/inspectionProfiles/profiles_settings.xml
diff --git a/.idea/inspectionProfiles/profiles_settings.xml b/.idea/inspectionProfiles/profiles_settings.xml
deleted file mode 100644
index 105ce2d..0000000
--- a/.idea/inspectionProfiles/profiles_settings.xml
+++ /dev/null
@@ -1,6 +0,0 @@
-
-
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\ No newline at end of file
From 85972f482d385fe24271678c38daa56602b19bfe Mon Sep 17 00:00:00 2001
From: rebeccacombs <71912974+rebeccacombs@users.noreply.github.com>
Date: Fri, 16 Oct 2020 18:15:40 -0400
Subject: [PATCH 5/9] Delete misc.xml
---
.idea/misc.xml | 7 -------
1 file changed, 7 deletions(-)
delete mode 100644 .idea/misc.xml
diff --git a/.idea/misc.xml b/.idea/misc.xml
deleted file mode 100644
index 7a85af6..0000000
--- a/.idea/misc.xml
+++ /dev/null
@@ -1,7 +0,0 @@
-
-
-
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-
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\ No newline at end of file
From ba0828f500c9cf55ae45686e407d2ea9aecab8d2 Mon Sep 17 00:00:00 2001
From: rebeccacombs <71912974+rebeccacombs@users.noreply.github.com>
Date: Fri, 16 Oct 2020 18:15:48 -0400
Subject: [PATCH 6/9] Delete modules.xml
---
.idea/modules.xml | 8 --------
1 file changed, 8 deletions(-)
delete mode 100644 .idea/modules.xml
diff --git a/.idea/modules.xml b/.idea/modules.xml
deleted file mode 100644
index 85d62a7..0000000
--- a/.idea/modules.xml
+++ /dev/null
@@ -1,8 +0,0 @@
-
-
-
-
-
-
-
-
\ No newline at end of file
From bbe01de7c837a06ea91dd1edb9d9839395bce804 Mon Sep 17 00:00:00 2001
From: rebeccacombs <71912974+rebeccacombs@users.noreply.github.com>
Date: Fri, 16 Oct 2020 18:15:55 -0400
Subject: [PATCH 7/9] Delete singlecellvr.iml
---
.idea/singlecellvr.iml | 12 ------------
1 file changed, 12 deletions(-)
delete mode 100644 .idea/singlecellvr.iml
diff --git a/.idea/singlecellvr.iml b/.idea/singlecellvr.iml
deleted file mode 100644
index 8b8c395..0000000
--- a/.idea/singlecellvr.iml
+++ /dev/null
@@ -1,12 +0,0 @@
-
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\ No newline at end of file
From 14efdddc459980658bea02a8665dd950932a6479 Mon Sep 17 00:00:00 2001
From: rebeccacombs <71912974+rebeccacombs@users.noreply.github.com>
Date: Fri, 16 Oct 2020 18:16:07 -0400
Subject: [PATCH 8/9] Delete vcs.xml
---
.idea/vcs.xml | 6 ------
1 file changed, 6 deletions(-)
delete mode 100644 .idea/vcs.xml
diff --git a/.idea/vcs.xml b/.idea/vcs.xml
deleted file mode 100644
index 94a25f7..0000000
--- a/.idea/vcs.xml
+++ /dev/null
@@ -1,6 +0,0 @@
-
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\ No newline at end of file
From b48f2142114dcca1f51469c3c8a2a2f3480b9bc6 Mon Sep 17 00:00:00 2001
From: rebeccacombs <71912974+rebeccacombs@users.noreply.github.com>
Date: Fri, 16 Oct 2020 18:16:23 -0400
Subject: [PATCH 9/9] Delete .gitignore
---
.idea/.gitignore | 0
1 file changed, 0 insertions(+), 0 deletions(-)
delete mode 100644 .idea/.gitignore
diff --git a/.idea/.gitignore b/.idea/.gitignore
deleted file mode 100644
index e69de29..0000000