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lint.yml
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name: mlf-core linting
on:
push:
pull_request:
release:
types: [ published ]
jobs:
mlf-core-lint:
name: Run mlf-core lint
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v2
name: Check out source-code repository
- name: Setup Python
uses: actions/setup-python@v2
with:
python-version: 3.9
- name: Install mlf-core
run: pip install mlf-core
- name: Run mlf-core lint
run: mlf-core lint .
flake8:
name: Run flake8
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v2
name: Check out source-code repository
- name: Setup Python
uses: actions/setup-python@v2
with:
python-version: 3.9
- name: Install flake8
run: pip install flake8
- name: Lint with flake8
run: flake8 .
bandit:
name: Run bandit
runs-on: ubuntu-latest
if: "!contains(github.event.head_commit.message, '[skip ci]') && !contains(github.event.head_commit.message, '[ci skip]')"
steps:
- uses: actions/checkout@v2
name: Check out source-code repository
- name: Setup Python
uses: actions/setup-python@v2
with:
python-version: 3.9
- name: Install bandit
run: pip install bandit
- name: Run bandit
run: bandit -r root-tissue-segmentation -c .bandit.yml