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Bug Description
When running merge on two different metadata files, if one file contains a formatting issue (i.e. CategoricalMetadataColumn contains floats), the name of the offending file is not listed in the error message. See screenshot below:
lizgehret
changed the title
BUG: merge doesn't list the filename when erroring on file contents
BUG: merge doesn't list the offending filename when erroring on file contents
Dec 5, 2023
Bug Description
When running
merge
on two different metadata files, if one file contains a formatting issue (i.e. CategoricalMetadataColumn contains floats), the name of the offending file is not listed in the error message. See screenshot below:Steps to reproduce the behavior
sample-metadata.tsv
sample-metadata.tsv
file and save it as two different files (e.g.sample-md1.tsv
&sample-md2.tsv
)month
column's comment directive in one of the duplicated files tocategorical
and change the dtype of this column tofloat
.This will produce the error in the screenshot above, giving no indication of whether the offending file is
sample-md1.tsv
orsample-md2.tsv
.Expected behavior
The error message above should begin with something like:
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