From 6aa3ff892b74de16380a5214af61b09a9b3b34db Mon Sep 17 00:00:00 2001
From: Robrecht Cannoodt <rcannood@gmail.com>
Date: Sun, 2 Sep 2018 09:54:17 +0200
Subject: [PATCH] update revdep

---
 cran-comments.md   |  32 ++++++--------
 revdep/README.md   |  29 ++++++++-----
 revdep/data.sqlite | Bin 241664 -> 266240 bytes
 revdep/problems.md | 102 +++++++++++++++++++++++++++++++++++++++++++++
 4 files changed, 132 insertions(+), 31 deletions(-)

diff --git a/cran-comments.md b/cran-comments.md
index dad136d..8ae3df3 100644
--- a/cran-comments.md
+++ b/cran-comments.md
@@ -1,20 +1,11 @@
-There was a problem generating the vignettes because ffmpeg was not installed,
-resulting in warnings on fedora and solaris platforms.
-
-I rewrote the vignette to use `magick` instead of `animation`, which uses 
-imagemagick instead of ffmpeg as a back end. The updated vignette is based
-heavily on magick's vignettes, which all build 100% on CRAN 
-([link](https://cran.r-project.org/web/checks/check_results_magick.html))
-as to ensure the princurve vignettes also work fine.
+`analogue` and `aroma.light` both get warnings as a result of the deprecation of 
+`principal.curve()`. 
 
 ## Changelog
 
-  * DOCUMENTATION: Use the `magick` package to generate animated GIFs in 
-    the vignette, instead of the `animation` package, because
-    `animation` uses `ffmpeg` which is not installed on all CRAN systems.
-    
-  * DEPRECATION: Added deprecation which will be triggered starting from 2018-08-01
-    upon calling `principal.curve()` or `get.lam()`.
+  * Removed extra dependencies in princurve by removing vignettes; fixes #28.
+  
+  * Fully deprecated `principal.curve()` function.
 
 ## Test environments
 * local Fedora 28 install, R 3.5.0
@@ -33,7 +24,7 @@ as to ensure the princurve vignettes also work fine.
 
 ## Reverse dependencies
 
-R CMD check was run at 2018/07/24 13:40 using the following command:
+R CMD check was run at 2019/09/02 using the following command:
 
 ```r
 revdepcheck::revdep_check(timeout = as.difftime(60, units = "mins"), num_workers = 8)
@@ -41,11 +32,12 @@ revdepcheck::revdep_check(timeout = as.difftime(60, units = "mins"), num_workers
 
 |package                                      |version |error |warning |note |
 |:--------------------------------------------|:-------|:-----|:-------|:----|
-|analogue                                     |0.17-0  |      |        |     |
-|[aroma.light](revdep/problems.md#aromalight) |3.10.0  |      |        |1    |
+|[analogue](revdep/problems.md#analogue)      |0.17-0  |      |__+1__  |     |
+|[aroma.light](revdep/problems.md#aromalight) |3.10.0  |      |__+1__  |1    |
 |ClusterSignificance                          |1.8.2   |      |        |     |
-|FateID                                       |0.1.2   |      |        |     |
-|MDSMap                                       |1.0     |      |        |     |
+|[FateID](revdep/problems.md#fateid)          |0.1.4   |      |1       |     |
+|[lilikoi](revdep/problems.md#lilikoi)        |0.1.0   |      |        |3    |
+|MDSMap                                       |1.1     |      |        |     |
 |[pathifier](revdep/problems.md#pathifier)    |1.20.0  |      |        |1    |
-|RSDA                                         |2.0.4   |      |        |     |
+|[RSDA](revdep/problems.md#rsda)              |2.0.5   |1     |        |     |
 |SCORPIUS                                     |1.0.2   |      |        |     |
diff --git a/revdep/README.md b/revdep/README.md
index 8199756..597531a 100644
--- a/revdep/README.md
+++ b/revdep/README.md
@@ -9,27 +9,34 @@
 |language |(EN)                            |
 |collate  |en_GB.UTF-8                     |
 |tz       |Europe/Brussels                 |
-|date     |2018-07-24                      |
+|date     |2018-09-02                      |
 
 # Dependencies
 
-|package   |old   |new        |Δ  |
-|:---------|:-----|:----------|:--|
-|princurve |2.1.1 |2.1.2.9001 |*  |
-|Rcpp      |NA    |0.12.18    |*  |
+|package   |old     |new        |Δ  |
+|:---------|:-------|:----------|:--|
+|princurve |2.1.2.1 |2.1.3.9001 |*  |
 
 # Revdeps
 
-## All (8)
+## Broken (2)
 
 |package                               |version |error |warning |note |
 |:-------------------------------------|:-------|:-----|:-------|:----|
-|analogue                              |0.17-0  |      |        |     |
-|[aroma.light](problems.md#aromalight) |3.10.0  |      |        |1    |
+|[analogue](problems.md#analogue)      |0.17-0  |      |__+1__  |     |
+|[aroma.light](problems.md#aromalight) |3.10.0  |      |__+1__  |1    |
+
+## All (9)
+
+|package                               |version |error |warning |note |
+|:-------------------------------------|:-------|:-----|:-------|:----|
+|[analogue](problems.md#analogue)      |0.17-0  |      |__+1__  |     |
+|[aroma.light](problems.md#aromalight) |3.10.0  |      |__+1__  |1    |
 |ClusterSignificance                   |1.8.2   |      |        |     |
-|FateID                                |0.1.2   |      |        |     |
-|MDSMap                                |1.0     |      |        |     |
+|[FateID](problems.md#fateid)          |0.1.4   |      |1       |     |
+|[lilikoi](problems.md#lilikoi)        |0.1.0   |      |        |3    |
+|MDSMap                                |1.1     |      |        |     |
 |[pathifier](problems.md#pathifier)    |1.20.0  |      |        |1    |
-|RSDA                                  |2.0.4   |      |        |     |
+|[RSDA](problems.md#rsda)              |2.0.5   |1     |        |     |
 |SCORPIUS                              |1.0.2   |      |        |     |
 
diff --git a/revdep/data.sqlite b/revdep/data.sqlite
index ee5c1b9e20751cdf976134d7d12f0d562e2cefe6..34e454c885f3dd537fc53b2f414fe8cf3db45860 100644
GIT binary patch
delta 20522
zcmeHP3v?XSdDhIVw6Y$og=EVQEUskmi{16SXLl`ZD}I29B^${P63f`*-I28R?yT5{
zjnk5~njB8jK)~5XHwnQ&N}V_au&U#1(l+mRX}|<>nvjwhCuzcI3AiK;=d?-t-PzUC
zl8tR4La=3x=5go0|NZa(zW<#=r>;2k;LLmHmue*?B`t@^Doz{N{qWTdm7ee6M#*Z=
z|9Jk}bH?+Zo?m%Rd!G0F$n%WnNzeBN`kpDP{`(TH>gu`CS+zdpg$21^EV{8VD9VZ^
zshS!HDuyPDQott$eWFZ6BgFoz^g%<o)!my+?6tyaI`au`UhcK64THa3{5AIy^wvBR
zhZWU0gsN~bDsfO};2^tkXeh&>+Lb%AymrZzp2`wW&hr<Z*`7*|*VE`(?J+#I$Mk%`
z^N8n%o^N@!dNz1o_55<MX6DbX*jgdX<<^^NYs1<rM^0<lY3tgKR<n2J$f>7Xn8mes
ztZlhs=%l(*n9s$cvFN@;v})9OZuhE3Jdb-mfu9c#{h+(FNB4ZHq^e`hruNMnwsv^F
zSTc)&!{6#&Gu;#Iidsp}lO?kXJ>#sh2s`)9O{;T#+sUBsmixHDM{aI%jVF}p0)bU}
zW|oi|Jh|;A_xR@xbo~?Dn%w=%ss{&ey_q{FFw1mlnmRc!Ycw#sgLD0^r0jPCeg83~
z(|+K$?kg~-Wo*W|vQa(oqZ#YY8yhuE397QF$hxM9fpLr#2&u+IjAenb&_g+ZGxjN=
z5B`XMj6S$txFxsx*{kTu7x)E(%MS-jN0V`WZugPK-0W>@TyjtjI;75>+*Uy=DuinX
zkI??IF^vazA34go8cN&^1ATSw>VfS-)xx=3nLwP{k*ogn>P7}c6je>ayeY;wyn`WG
zIty<Hfx)?-dCKhp$`uT6D-70+_;bhaU6xyZcyIakmiD#{Z8vyx_iUXz`1s*3j^Pu$
z|K-8}6g^<D0rYT9bf8w4oh`oCX|GRY><CHsSfncvizN<3?QW8acH7|1uxY2s0W)di
zUMkdSciMz(FI<Mm;@)J`4o7><m_M9J?za|`Xo^Iv-eeKOb2rYO)q3sltE4Mqhttu7
zog#7bAlYL9taFQ)DUwPgZ1y+N<=|{vx2H+cidkmL!o5zr-QQ_<SQc3|0?*&H)7xYx
z(pIV|w4*89V}<ucsk=g0GSM7<`Cg8ba%U2CrKQ)DlwLE?H?Oq%#LX@?mGd!`zuthU
zG<-$s+13Hc57LT3Nt1%Qq3GkLRT4u|aH47bawDeo=kDC`r~eE5SN&#BM|@hQ1MJH*
zxraW!N@yH>z-MszT{XgM+~DeGK37$bCo}z$3{r}!E)t*U7bPVq<z1(^7d`B0jT{UF
zby*Y%`zQJ(P1f?RSBg)sBt-Iynkp;Mi=B2eAv*#mTzuixTA%Kh3`v1G3Iv?ji7)S(
zS$tZjNKyf!7*GP5r~!K3MT$>n1r$sy@k#!GEC+SP@`-BRCE_VFMzfvHXugfVDZhF(
z|EPm$Jt4k;U(t+!qNBOeX|E)C*XAO?Iijd(xQ%X#sObK@Yj^SKTy_s{v(ADdn(3W(
z-ql-tI?vD@kdi|mQ8Xk2G&odzI^Qn^gPO|TDw06<=3Vy|pI#-ZfGqiSLzN`f26*LN
z4;G&;Fu=tQY_yX7vH@D<UB`=0OMn#K)D2Aw6i`=z^H=#VlnREVGtKhh{Kju{gTv}4
z4}0D&j8>3({@9azC+Fr*l*~x*CkFbC@t*hp%igl;1qIRiV1JgHKjzgj!WGmpqF@j*
z77S?PoCrw@se$pr#p}7>F7D62_8jjj&24(DrWSK__51JIP|CWgfdqe`{|45Lz9<ok
zNdBN9X__Qyx~Qt6G*%~12%j5<f5yd(2{TzFSL18U-xCqyJncNi9|1pCb5kJF-B#Kk
zGvnvhtdlj$j#1W=wR+<kWiKA}DM2dB%;Z=jG_6F)lEu^7-}vsblUU;ELMqF=2Dk~+
z)!+E;vgdL~rU9w!XkTd>`WxR}_M$b%l!#wC`(}vWh|@<lPqi1B-~251uq$hLVPJz1
z91P}VjQGQo&T%u@3g;C5vJ>d;N+)&=Im~t{ZJA6<H52Bu_E@prC7n$pgXnBpN=$g?
z#Rtse&N}b<BE#M?+5mtClMcirg&`Jr0};y>-1`YIn-nn(h{;kI*oo&s47Rkf5Z|zd
z6H=`e*6<?8HZgL|bl^E|LDun=rh6hsFsc|Psh>Xdb$%8Vf6UFw$_mJ)h>UEqGqdNR
z-FfJCp=6ua+2jOxEVLWPZFJYy`D?Rp9=#lLl|~rj(?eh9_h#X}K`M17m0BP;y>tSZ
zvMdmufKHG~ok^w6q*4o>kNGcp0<)ua!FYW!DPoXHUDm=t4D6)^5er<bGP}7L{!gt~
z&ZgDRaaC_No0U6k2HMbFOjBqVPo=3K(nOkK2BVXk?s$&7HfzXWH$w)y>47)W2n;K%
zvD}uOR1ORo>}JRYL+p(c&|#PN^;;)H4gxU+a-avLOP$<zz8x%6UDi;bZ4FgrG=q`S
zgX*Oc?t<txA1=~c$24K(1H{tQh-QeF%wQKpCq|~pO_MGex);e6C8A668|DCAglW21
zD>R{g%?`QF=k%#3wvkhTNcO^<`zc2x%hK{wXO}NH+R3IbG2FRCie#rO?wS}82v8sl
z0dhh?N%hOR8qj1y6u+V%b!pIhe!_iRK+2k4_ix;ZYh+PIYsJw6MDr`6B<VqxZAFGt
zltqI0r>XyW?qhgErT0D0oxq7sJAUe%1Zd^YxD(~FWO#KfebMj!j0>>j`2SY9@ZQ3s
zFL46Ph8Hfc>Hh=wa=EOdts-gp-~WM|!6O@9czEs6Y94K8^7qduR~R@&*Yd~a^4kRl
zY0=RI>?tWWUVPNYE=4|5R*v-z);N&w)A@IE<%%JCbrs-$Ztx3A*}F@QUe62kTWx$Z
zONM{d!EEW#Rt8`*e_N@bf+V+Z<&RZj{VuF4D)R+sb{pS7Z`#JcuUwU70F>4I54Z9E
z&fyX&N(FA;xP`yo#o#YHx|6}$UBvCWqj7fG%Lmbz;idtZb+_^VSjifDkKVza9x68W
zeg1C#<9xZs2CPW|`p`Z6E{f#%ugZ~E#w~RF>b-oOfXe_bRW<MV8~#i=gXI7G{rnD2
z&{Un?dW8RUIo7n%0&`IP0RJjWp}#t#Tyy$2)cpS)<2i?r%Rm1pFLS)1Q}r?aBW@$;
z)pg+a{l|EPW102BWQa$<#IXD-|9dVQkbp=)k|S73`cv}XfRoA)(-~raO8y&g!b}8Y
zHOv+@F4YZrTljCaS<nk|6;KpLG{uX<v^sECu^iW1#DUwFl|<ERNTMEr`!=m)Do|<C
zkP0{jfS4pQ#NN2D^uj|b;3PA|0%0I_$tlveiAWk)dIZsAgApz0HQ)?fsxrF}x9_bY
zlKI|mz)a4NNU{EcF8DdWklytzzB;$Af8nUbW~>6EY^NTp^)hNd($Tn;$fQyI(PhG#
zm-NpT-Zgb~Fq7u}$FImtv><bNmG;e8CK{QU%d51PS80bU+Ac|wFK*TJ?Y>HT^Hi_W
zHqn<qC@eaw7KtBIi^Q{9B<==O`q48l^R<8bP&-FAT`yG7Uq8cToLW%SR)+E@3Vncc
zq3BF06gY9e;J+|ql$GJ;(O2ApoS*$i{x@71=XRI4-2;7pD61Z@-Bn8cc2;h5>W+T5
zu)YyMWL**sHK2<)9a9V~p&0t?+Ru4;z~;+YjgiER);W;8pDUC7BHX}pp;?!I?IpgP
z??1_xmE8$MOYS_}_nzv{?VnM#p#EJowbv>Cy6~fWg=P|z4AgA1QaM#s#v&@qAx#@w
zaCLlvpyy+paImxnIBElS`Iv#XEOJUDQNe}9Ulec|aBs#}Sz+|@SfH#FoKd!p0_BE$
z`f2{8n}y*@|88N{;OfWzi5oor^t}^J8JoLL<iArVEW*68(l`{RJvLk#od>pCc<S0M
z)VzKuNEM8S;sca&UN}-R<GsR>fxeFjJ&$ayteRin!HRvK4foX-i?~su=oi<Uk)9Z7
ziJAKjm?mlNG7D#`d&~o7H0rk^nU!suwybmLqy@BqYM@3~Mydgoj-yNFWzb1Kn@+XG
zzLo>P@}c7KmlogeE}r-Qgr7%^AMmyFi#JXm`Z(EdB~z%cC8rO4%)yZ+?ibqVgMTH=
z&YxT%Y~qGqrZvy=YvK$&R!GG>N;4L-BB&33kHsoRk;4*O_poQF%pPAPirU|FA{n)u
z@?5EP4@o3RJdw0eJItyYBWBuUe_4JkP<W3J6z~@BOMbjU&1ZRe@c1|1%`t`weC|L+
zfj@l({xs<0L7}uUsA8qp2p}yXBBe5pP!n*eZ-`5oIO+H;p^dAApU~Z9LM{EuDxoI#
zfbV_T!a&>1xRvTP!x%->CL7|tiDWuOP^lk_5L6M9sB;HY=t?Hy&d5N<Rx_Q9-p*)?
zi-@&9ok+w|#Y+ovFBQ+bV{zL`7cY9uR8R4=*Ni7u7SEF?`AEdqgKjC-lF_au7DEwq
zIA$i%?+{9<o<s&Xp*}j3f)|y4B_dQg1&G^xLsQm<s^<_2yIG01f;v_dR44ZV#MUkA
zeF2gJ&Zz9BHMPR};VO7&z8<$i7=#q_uf=h$H8*cUmh)`8$p!WuRVDukQ<z^Q=``_9
zlebvijS_Yg$XIrS9y*CqiZ^*)TP|&0F{+%u<2wHZ&1n;rzRk_g7G=KE-V#m6zzMBZ
z+T4?fCF0R=ifo1!NZ4i!!W<!+u^r_As_k2F<6sK1y#*ZHX>TiNiV!Qe_9G^3$)tM{
z$<*rh5D6~<XZAWUkkE0|TxXM)bT$=r9WEM(6*r?Xay{-&p!n#DU-AvvrQXqSI-+}{
zW&zHP8Po1&rz1d8VKW)C(rN5Wun(^8X2AX7M4UBBCSn#k3NJxlW+sg#;H67D?X^}a
zoQ(Fe-2@@BCK2z=U>kt5bAau?VFS)atfbYQiJ7boNrfSH5SSz}Nq2O=g*#T7Z8nG(
zC>O=+Ufhd8(~W_XA_t=B9tUzyw7UnQOX8Vy#*9IU09?EPo)vRptA))Z)_FZnvgrib
zlZir*O#%T=rJPMcezM*_WHh{_!%rMyc%Ak3jec^2nT$i*k|j*_EhWv7L^LE}iX>55
zE(a8pfUQJPSW!`6s-QR0UV^bDdt(Wl4QVKxWqV@>lb|tEQeM)%CyqlmYbE2v(N=7J
zivO6#@{$|l(Nx&$3=D%wcu7I~c?r{EUefMQ;NEbC52x*$){Fu&TEBV89H_Y-v)4j*
z?c1$=CaCMEr6fK6A)&6;FJcxqM#Gk!0{`Byd81FJU%X3LNPqf0Zcc5?w9W1UEryIA
zJ^Wp+aoz+EmPb>mjFqCt=LvOl{n&{EcJ9b@cVntjA%b~Lr+dtF?$FL<Sy?6UbtD~|
z)SxQYtRQ<1X6$G>HN^iRGS;f^0K<X2No%JwOoxXHGe+2>ot<{88MV{+wUXoCoxmgD
zGb?FdtKeO1_!N<#3?17@M1^6(cCx@U?K8VAwwI+S-n8#-n6a<Lg=J%$(~0ynUG)Ta
z)3A9z`~+7&e6hJf_-DHODXxL;-6W_(w{xG`_3m<I=N)%kHkwmoG_mbqh*fi*u6GKm
z5nyh6%Gp_V*=E9hVp`;~&Ae<gFWbx!!+Y6go+pZ)YMVJqO<$DFyn@+GXDf3BDXAa>
zeX}c&C8)Z@EP=CUO~=*)T~rLjzCn3hHsyR-f>FcD{aIuQ*#5hqL+8@+lG5^lzCXI=
zd^A&CHLHGKJ+d*!Jbm?S$3606evQ^>!ty2S+S@m^gAR&c5>cary_ne4cy<;cNS_W0
z<`{>HzM=`Gd4E8t<2Y?3XF`!PsoCRz?X))+yff@czAXa}9pQN<?W7IN{RmdfJuC`?
zjVs7=7@=6Z6XF*(EvFDw6!S7$upxWxx{fvN8#Zs*u&E9Chgj~(&n{}}wBx3YumbM=
zGO~748!|H;X)~RH3o8)^2YRYUsLOqJ>*)0`mQMrj6u5h^GPbahIg-fc;63<}5-uW{
zq!Xgx5`>XN`pPU}2Nub`vO;K@rm<BFkFANm@IgVP3pNPrYq7Sy7F*s!q>$xdE^&VU
z2H{3wZEq%-M7WWTMh+GNGIqWP6do08Ae2eO4zgGe5n>_Gz=@M!afnZUvr*VzUGTGw
zkS4KR__wtR&4pXC;<(;2{fAaz8K>pW>|A;_L(r9Ng0!$%6pQ&WKb9KVbYa_i0zn>2
z8CkbSQ|XntzuVP}jPvQI_@)Y>WD&TPrzMLHx6GOIaM#SLxwSi3zW6)tzWTz~Adn8D
z-<O4@g^j9;E-Q+pAT4N!#<&Es0yHN`Ak*3J73So>qzG=7=)Ua-eD_rlmX!~8c_!^_
zIe{q11_VNpRdHNmZPIS+3A(xdqnRttCxl2@%6?>}bX`-VpsLE_KNEtFE}SKVc`)+a
zx2F8ny&ln1)XSoWsQ2}VUL9?16PhkW^j_wh@-Og$#L-7pp(4NE6drO5V0nrN?8Edk
zQQ<%>s>nv`8+^3JpfVOlmU_vWo+RWLK|E<eLI#Q+nJCg69=hxADcs7Ndxb8(k}O$y
zJxV(zzr2)wCnj7iAc00-j0qhx0h56xk{XhbW{~N|xUiylH%QnwBM|QgC`CZezC|%k
z>EvhI!f&{<hoKh&$+ylh-phtDut#{OE010CA&$QE0)GcR{sH0Ek-hWll1b#^kcUrN
zJ||0tgf-cZ&y#@k7W*a%A$~t>VWC|zW3z3*O#7y-B+^kxq=$WBB<-;IGK|)1oQyeB
z$z4&T;;h@Pa0VGs=;|?Tvx#sKWC(ez1eO9)qx&U`3*Qg&x5p!kNf+!o?7Wlyi$u+C
zI{_XEGu#R=VFtpPxP?!tgcJ7A%FF1NEN6@X?7&**;1f+$*rdnA5F(v6J$0I2F{<Ka
zV&nee-NGCwmln4c#77!*ho7BKy`1KKZ+Bu=ju6vX9DYwN>iEWsc>XW{TDXc6)^6HB
z@B5JO4*KecgvJKa+hdvOxY;{8n>ielQTZ-mi60-NLB^E1QpgKu($N@_gd<r+cyQKj
z$ZSTCU5wfXz4XvsLjT-?@XH}p3Tb*F!5Hy(gL$2-Uv=TJ5>lZB4BB(I;N{e_wE(8v
z&9epUr}#Q|S+Jz?s<PlfpRa7*v0JXJnp?kveXZu?&c6BrtFrXHN<Vp@uz1wxHNY&2
zf!#bPOV_d3JKo#}S@&msql>=ys4$1#^-1A0eMeBZmbN`0xT*atU!H$pg>Z<=NBe}e
zTmu}9mSgX#8AfE+<cPo(ceqvy8UZ*r2x#Q73wjC=nPBCUGNwN_BI`J|-nR<BCHdof
zgpHRK4V3AnDH=>ZQ#56mGH?#Fo0s(rGa}K%pR1mE6nbVR3lU*9olj_q$ZY&SL;9>)

delta 5016
zcmds5dr(x@8Q-(t!t&VVf(zc|AuJfc2fN(o?!7CiFK|o@^76%KETEf8C4ejHXlmj*
z$=FV<5pR>zHknjASQ{M`*qW0`+d<Q6V~ki$tdq=`s+~+K(MD<~i7|il+<P$s<xxA+
zX{YS$<^JwHdw%!(eUI~<yKQgswkt`yGh=)fi)BW;XD0G>)pg`dv@@6K1xt{*%Y4T4
zGdGxznQP4DuE=j<o!!~Uk(1t-=JJYHYc*@({9J{TIe`~MNt8uV5jbA)asjU(d3Z4>
zNI{;%pK`D=W%cIfjiK=RP;paZL%2TN7}EL=WJLQm+2c|vm6Sved^|n)?DXJ_(fW&B
z4<$2`EsVxI#rT-XOev!>%a{tLnW<-9XAUtJnUl<I=A&pz^4%mYab|*;oB-))UVU5W
zky1uKEibJpuWwDdf9i~bG*n$vI@@vYM5~*5$oU4dpZW2<51lT;OlJ;T95r(*sw*E^
zT*LHQ()1tE|IXI>wl$4UG={<yB$)GSzpI#~U0Ldj)-KzOqCHi4wvkQM`U<l(&yu+|
zsuz#90<4dIu;fwu=z}r)G|biRPH{$~E344IMzO=B@bmt__!K*`2T?TFAloHN?4_>A
z+5do(C&X#&vQ*v2u}*qGv4g0rgX3w({9O9*g2Hng7YK+vKP;Z)pd^eLPdiMiILe|2
zk_Dfi4S&OxAAySZA_!_Nom}*A`?-;wRHF5~IM*i1s%ogGeXt|}zi|=eYn5-E)-Kd$
zMSt+4u9y)$Rx%*vFPP}NuZRdJdspQ1SZCJ;a7<2LY@`dT@h1b*7FH}OYiU}|`*a#!
z3It@oqDs;*JN-d{AH~jS|AE9ft@C`UZezj&+gPA^PEDkCmRSSBgIa0)cCe*9inCg(
zbfv4>BW299JHHj<oRq#eg;s~}V!%(ok7nd5ens}v0^#Rn)gKsUrxFyUQS7AkArn9U
zsWlEid<MD5@psWnF)7sCq^=FN5j1TMZQ^}`>X#KsP!u7c3c@h1K#*5Q=PHPLPTjHV
znmXv0AzfFY1PJ$M<V0HCA|~4U-tI))Z?&e{=<VdF`^sM!+&{sDDN*+=9p;&E!ZA0}
zp<qH6aVHyij)_x=+hgEr6Q>b3XW#}CPsDGpv(6y1R#}fbh^rjkwBnhwQ3AdjwkGK0
zEOA#F<F}jR-NapI;5{ZzC+=1qr+1q;gSfXD_Xlt$aql+po96v2;@)fE3nrdK+?@u#
zW?~C*A4jjnAZ5>MYqfJr67em7Oj36WMMuse(`$r!tr$j3mced)wHGZ#x>Y%(3)vnX
zNpY8c+Y@E4TsIUqU~ZJXrNca{0rQTrNQZ(6ClfZ=z;jIe5MezAt~PN#VL1agn79C+
zUS};CQSo@4ypXV!#`x{#_$h>~Gw>c0PbF-tj;Z3t<4hy$Hsk&Po=(`^27c4LUqslw
z2EJfoFJU_ke9gob!X8Jj$5=U|4(%FG>r7I424#(*brw0;i<Tq1rOXmvZ7FMys7$xj
z?hx6fdZu2@kFfYe2DtFl0PwkrDDnZtFY=O~eun0dC<eJP@->5e833BF+%=ToqPi77
zyYq?I`vn2%1;L+hWU5NbyPx(9q9jw2p)3Ne3iz)ad~@{Z$<*t?Ph#|R&8A<A)>HkN
zcB|%PLW}(S$VP1t2wh|6C5$*l2Byy`7=?_~Ccy#pL$D2>K?z7>&%k~?gAWd)*vBog
zw=IviN2;8M6XP9|*jioMOAGM#8zE3Y3%=m<^C~AxvZ$)6A`UBrB3;<VC{7uqnTHo*
zaNVCwVTEpM+z9Stb@wTfBuX4T`1#?>=lJep@3~J`meZBRk>7$VT6g4S6zx3Ufpn4e
zmGnJwz7z_OjT&WiGrP$5=7DFFb_Ua@&obo3-x0t;<b`k!jW@BN8a>Ro6UXD$Z`0V-
zyQP8ISJK&&Vk}`x{93zUyJJ0O3Aab;+#O1iBi*$;#Wh_#<&Cgr`^Nh?e6$;;=9_D>
z%1JUW($zy&hj~Z}1m&?jgttb)jwgKxDO%i=7xDC8!aBs^_O-xeQ5BUA)oGG@|Czkl
zqlh#K^kq`vxM3}iqy)LKT4+LfbI>5FK!?xaNMqL;cE(3oy>}ISoKM1@{ZL$3vB1bb
zPLOzs=AbNa!(&mRO}jYyLYaXd>w#3_{5ixR?D+!nb^H7szQi#}4S6|{6a92?R%mNS
zi3jf##wR^GgjDYY<iiOGW~NOa$g~oVUyx+F6QKn_6^AJ~UXJNe8c%32?KBfjPXUpB
zEo7en&m)^IWOU!5<u)S`hV+y^yyYay$BzOO+o+L}-dOFz1qWfCOIp!fO7|o|k7=*u
z6=d?vL6{F*_1u=GmhhZ#Xj3R$<Z0ay4u^|YG<ydA+8S4HULR@-t!gXsv^6#~G=*^D
z5!mRIydvijcztUn%XrrjC>gjU1O*|;`*Bq{&4#`sz#<86D~GA0RKUlMf*)7*Lat#K
z<`)8Mo>eY{+4y2FY{6^Jfn;9$Sp_sakP22#z)u0}{vX$%=fN~sPm(Xvc7@0%;E)|?
z5jXw3?lf$2afAFE@bbJ@Q1RW<P(q%38)~ii{5y~XoR7!1-+`LsfdL*~2y#MD4&Wtc
zVaENd0h;pqLc8xQOvBw<VcIA@q^a*FzFznv!nRqEGUVx0ztP_B!vD>uvlChnKSsFz
z02FFHXBchos|Q~2*cjZ|1e<Z+SCBwHyaPdmXZ;j@eeAexe++*3B&x!{dJFPm1)t0*
zvMI5*4;EzzgCsUyGH~*W=GhzC*0kV1^g$8+eIHzh)h&%U`U%WQ+tSif<S8wy39S=~
zJgY<N+ZvlU7vaBu0(sf@v#fPZsJ`vV`c|5M;l}1w8^RkyMOeB4Q{ulKgIC;uY<zhE
zB;%KEz;n)kmy<nwAV>?dBx3JPP~y!?YEZzDt-#{vZbCYKrhGKFk?S|XZpF9Gp)`Bq
zc8l{w;`Xk{#>9*cDcO<E()Ech5jhdoe3L;##wXxc`k-)%QMq+dBw1EPMWzjuJgjq)
zB^pm-mG1aBn;U=QbGU{CocjeV)SIUn9TGDRvC+Ti-k|$9MWDMlTEvHxZ=HCw4Xgg5
g2giQ}Uk-5Ubyd~t>c1Tpw6FPp3=5~t42$G{0AsT}F8}}l

diff --git a/revdep/problems.md b/revdep/problems.md
index 897c810..c619fe5 100644
--- a/revdep/problems.md
+++ b/revdep/problems.md
@@ -1,7 +1,52 @@
+# analogue
+
+Version: 0.17-0
+
+## Newly broken
+
+*   checking examples ... WARNING
+    ```
+    ...
+      Warning: 'get.lam' is deprecated.
+      Warning: 'get.lam' is deprecated.
+      Warning: 'get.lam' is deprecated.
+      Warning: 'get.lam' is deprecated.
+      Warning: 'get.lam' is deprecated.
+      Warning: 'get.lam' is deprecated.
+      Warning: 'get.lam' is deprecated.
+      Warning: 'get.lam' is deprecated.
+      Warning: 'get.lam' is deprecated.
+      Warning: 'get.lam' is deprecated.
+      Warning: 'get.lam' is deprecated.
+      Warning: 'get.lam' is deprecated.
+      Warning: 'get.lam' is deprecated.
+      Warning: 'get.lam' is deprecated.
+      Warning: 'get.lam' is deprecated.
+      Warning: 'get.lam' is deprecated.
+      Warning: 'get.lam' is deprecated.
+      Warning: 'get.lam' is deprecated.
+    Deprecated functions may be defunct as soon as of the next release of
+    R.
+    See ?Deprecated.
+    ```
+
 # aroma.light
 
 Version: 3.10.0
 
+## Newly broken
+
+*   checking examples ... WARNING
+    ```
+    Found the following significant warnings:
+    
+      Warning: 'principal.curve' is deprecated.
+      Warning: 'principal.curve' is deprecated.
+    Deprecated functions may be defunct as soon as of the next release of
+    R.
+    See ?Deprecated.
+    ```
+
 ## In both
 
 *   checking for hidden files and directories ... NOTE
@@ -12,6 +57,49 @@ Version: 3.10.0
     structure’ in the ‘Writing R Extensions’ manual.
     ```
 
+# FateID
+
+Version: 0.1.4
+
+## In both
+
+*   checking re-building of vignette outputs ... WARNING
+    ```
+    Error in re-building vignettes:
+      ...
+    Error running filter pandoc-citeproc:
+    Could not find executable pandoc-citeproc
+    Error: processing vignette 'FateID.Rmd' failed with diagnostics:
+    pandoc document conversion failed with error 83
+    Execution halted
+    ```
+
+# lilikoi
+
+Version: 0.1.0
+
+## In both
+
+*   checking installed package size ... NOTE
+    ```
+      installed size is  5.0Mb
+      sub-directories of 1Mb or more:
+        data      3.8Mb
+        extdata   1.1Mb
+    ```
+
+*   checking dependencies in R code ... NOTE
+    ```
+    Namespaces in Imports field not imported from:
+      ‘Matrix’ ‘devtools’ ‘e1071’ ‘glmnet’ ‘hash’ ‘pamr’ ‘randomForest’
+      All declared Imports should be used.
+    ```
+
+*   checking data for non-ASCII characters ... NOTE
+    ```
+      Note: found 3837 marked UTF-8 strings
+    ```
+
 # pathifier
 
 Version: 1.20.0
@@ -36,3 +124,17 @@ Version: 1.20.0
     to your NAMESPACE file.
     ```
 
+# RSDA
+
+Version: 2.0.5
+
+## In both
+
+*   checking package dependencies ... ERROR
+    ```
+    Package required but not available: ‘randomcoloR’
+    
+    See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
+    manual.
+    ```
+