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Can't build the image. Missing RepeatMasker EMBL database! at util/buildRMLibFromEMBL.pl line 83. #6

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luciazifcakova opened this issue Dec 9, 2021 · 0 comments

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@luciazifcakova
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$ sudo docker build -t robsyme/nf-repeatmasking .
Sending build context to Docker daemon 12.29kB
Step 1/1 : FROM robsyme/nf-repeatmasking-onbuild

Executing 3 build triggers

---> Using cache
---> Using cache
---> Running in e5ce8b8923ee
Missing RepeatMasker EMBL database! at util/buildRMLibFromEMBL.pl line 83.
The command '/bin/sh -c cd /usr/local/RepeatMasker && util/buildRMLibFromEMBL.pl Libraries/RMRBSeqs.embl > Libraries/RepeatMasker.lib && makeblastdb -dbtype nucl -in Libraries/RepeatMasker.lib > /dev/null 2>&1 && makeblastdb -dbtype prot -in Libraries/RepeatPeps.lib > /dev/null 2>&1' returned a non-zero code: 2

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