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NAMESPACE
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NAMESPACE
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# Generated by roxygen2: do not edit by hand
export(Cerebro_v1.3)
export(addPercentMtRibo)
export(calculatePercentGenes)
export(exportFromSCE)
export(exportFromSeurat)
export(extractMonocleTrajectory)
export(getEnrichedPathways)
export(getMarkerGenes)
export(getMostExpressedGenes)
export(launchCerebro)
export(launchCerebroV1.0)
export(launchCerebroV1.1)
export(launchCerebroV1.2)
export(launchCerebroV1.3)
export(performGeneSetEnrichmentAnalysis)
import(dplyr)
import(ggplot2)
import(scales)
import(shiny)
import(shinyWidgets)
import(shinydashboard)
importFrom(DT,datatable)
importFrom(DT,formatPercentage)
importFrom(DT,formatRound)
importFrom(DT,formatSignif)
importFrom(DT,formatStyle)
importFrom(DT,styleColorBar)
importFrom(DT,styleEqual)
importFrom(DT,styleInterval)
importFrom(GSVA,gsva)
importFrom(Matrix,colMeans)
importFrom(Matrix,colSums)
importFrom(Matrix,rowSums)
importFrom(Matrix,t)
importFrom(R6,R6Class)
importFrom(ape,plot.phylo)
importFrom(biomaRt,getBM)
importFrom(biomaRt,useMart)
importFrom(colourpicker,colourInput)
importFrom(future.apply,future_sapply)
importFrom(grDevices,col2rgb)
importFrom(grDevices,rgb)
importFrom(httr,GET)
importFrom(httr,POST)
importFrom(msigdbr,msigdbr)
importFrom(pbapply,pblapply)
importFrom(plotly,add_lines)
importFrom(plotly,add_trace)
importFrom(plotly,event_data)
importFrom(plotly,layout)
importFrom(plotly,plot_ly)
importFrom(plotly,plotlyOutput)
importFrom(plotly,renderPlotly)
importFrom(plotly,toWebGL)
importFrom(qvalue,qvalue)
importFrom(readr,cols)
importFrom(readr,read_tsv)
importFrom(rlang,.data)
importFrom(shinyFiles,getVolumes)
importFrom(shinyFiles,parseSavePath)
importFrom(shinyFiles,shinyFileSave)
importFrom(shinyFiles,shinySaveButton)
importFrom(shinyWidgets,awesomeCheckbox)
importFrom(shinyWidgets,dropdownButton)
importFrom(shinyWidgets,materialSwitch)
importFrom(shinyWidgets,radioGroupButtons)
importFrom(shinyWidgets,sendSweetAlert)
importFrom(shinycssloaders,withSpinner)
importFrom(shinyjs,inlineCSS)
importFrom(stringr,str_length)
importFrom(tibble,tibble)
importFrom(tidyr,pivot_longer)
importFrom(tidyr,pivot_wider)
importFrom(tidyr,spread)
importFrom(tidyselect,all_of)
importFrom(tidyselect,any_of)
importFrom(viridis,scale_fill_viridis)