Using Integration and SCTransform vs AggregateExpression for Differential expression btwn conditions #8918
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CYBORG2541
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Using Integration and SCTransform vs AggregateExpression for Differential expression btwn conditions
#8918
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https://satijalab.org/seurat/archive/v4.3/sctransform_v2_vignette
https://satijalab.org/seurat/articles/de_vignette
Looking at how DE is done in these two makes me want to ask the differences between the approaches? Is this SCTransform+ integration capable of being placed into aggregate transform instead of Findmarkers?
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