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plan forward #85

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2 of 10 tasks
stemangiola opened this issue Feb 21, 2023 · 0 comments
Open
2 of 10 tasks

plan forward #85

stemangiola opened this issue Feb 21, 2023 · 0 comments

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@stemangiola
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stemangiola commented Feb 21, 2023 •
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  • create a usage statistics with NECTAR
  • create a function that passes the full dataset metadata as list of tibbles
  • build an automated DB upload and update system, when a new version of the DB is created
  • publish Python API
  • ask for more disk space, to allow 3 DB versions
  • convert CELLxGENE processing pipeline to a more standard framework, to update our database in the future
  • use Anndata for R and Python APIs
  • Better automate cell type curation
  • make the DB portable for institute to setup local cache like WEHI has
  • make pseudobulk available
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@stemangiola