From 824f563e79113d17fc039d9ff3b3a5c758537ec2 Mon Sep 17 00:00:00 2001
From: Maximilian Held <info@maxheld.de>
Date: Wed, 15 Jul 2020 13:06:20 +0200
Subject: [PATCH 01/46] login to az

---
 .github/workflows/main.yaml | 22 +++-------------------
 1 file changed, 3 insertions(+), 19 deletions(-)

diff --git a/.github/workflows/main.yaml b/.github/workflows/main.yaml
index cd93a48..1092a02 100644
--- a/.github/workflows/main.yaml
+++ b/.github/workflows/main.yaml
@@ -48,26 +48,10 @@ jobs:
           tags: ${{ github.sha }}
           add_git_labels: true
           push: ${{ github.event_name != 'pull_request' }}
-      - name: Setup GCP Cloud SDK
-        uses: GoogleCloudPlatform/github-actions/setup-gcloud@master
+      - name: Login to Azure
+        uses: azure/login@v1.1
         with:
-          project_id: ${{ secrets.GCP_PROJECT_ID }}
-          service_account_key: ${{ secrets.GCP_SA_KEY }}
-          export_default_credentials: true
-      - run: gcloud info
-        shell: bash
-      - name: Deploy Shiny Application to shinyapps.io ref
-        env:
-          SHINYAPPS_TOKEN: ${{ secrets.SHINYAPPS_TOKEN }}
-          SHINYAPPS_SECRET: ${{ secrets.SHINYAPPS_SECRET }}
-          GITHUB_REF: ${{ github.ref }}
-        if: github.event_name != 'pull_request'
-        run: |
-          remotes::install_github(repo = "subugoe/hoad", ref = "master", force = TRUE, dependencies = TRUE)
-          rsconnect::setAccountInfo(name = 'subugoe', token = Sys.getenv('SHINYAPPS_TOKEN'), secret = Sys.getenv('SHINYAPPS_SECRET'))
-          app_name <- paste0("hoad-", gsub("/", "-", Sys.getenv('GITHUB_REF')))
-          rsconnect::deployDoc(doc = "inst/app/dashboard.Rmd", appName = app_name)
-        shell: Rscript {0}
+          creds: ${{ secrets.AZURE_CREDENTIALS }}
       - name: Deploy to GitHub Pages
         if: github.ref == 'refs/heads/master'
         uses: maxheld83/ghpages@github-token

From 0e4985610de9cfd55fdd84dcea6a4931072720a7 Mon Sep 17 00:00:00 2001
From: Maximilian Held <info@maxheld.de>
Date: Wed, 15 Jul 2020 16:44:11 +0200
Subject: [PATCH 02/46] first install az

---
 .github/workflows/main.yaml | 8 +++++++-
 1 file changed, 7 insertions(+), 1 deletion(-)

diff --git a/.github/workflows/main.yaml b/.github/workflows/main.yaml
index 1092a02..cd0118a 100644
--- a/.github/workflows/main.yaml
+++ b/.github/workflows/main.yaml
@@ -48,7 +48,13 @@ jobs:
           tags: ${{ github.sha }}
           add_git_labels: true
           push: ${{ github.event_name != 'pull_request' }}
-      - name: Login to Azure
+      # here are instructions for minimally scoped auth https://github.com/Azure/webapps-container-deploy
+      - name: Install Azure CLI
+        uses: azure/CLI@v1
+        with:
+          inlineScript: |
+            which az
+      - name: Log-in to Azure
         uses: azure/login@v1.1
         with:
           creds: ${{ secrets.AZURE_CREDENTIALS }}

From 1cb456c70f87e8de471341859abbc5ac95b8b02e Mon Sep 17 00:00:00 2001
From: Maximilian Held <info@maxheld.de>
Date: Wed, 15 Jul 2020 17:04:16 +0200
Subject: [PATCH 03/46] auth in separate job

---
 .github/workflows/main.yaml | 20 ++++++++++----------
 1 file changed, 10 insertions(+), 10 deletions(-)

diff --git a/.github/workflows/main.yaml b/.github/workflows/main.yaml
index cd0118a..1caa4c0 100644
--- a/.github/workflows/main.yaml
+++ b/.github/workflows/main.yaml
@@ -48,19 +48,19 @@ jobs:
           tags: ${{ github.sha }}
           add_git_labels: true
           push: ${{ github.event_name != 'pull_request' }}
-      # here are instructions for minimally scoped auth https://github.com/Azure/webapps-container-deploy
-      - name: Install Azure CLI
-        uses: azure/CLI@v1
-        with:
-          inlineScript: |
-            which az
-      - name: Log-in to Azure
-        uses: azure/login@v1.1
-        with:
-          creds: ${{ secrets.AZURE_CREDENTIALS }}
       - name: Deploy to GitHub Pages
         if: github.ref == 'refs/heads/master'
         uses: maxheld83/ghpages@github-token
         env:
           BUILD_DIR: docs
           GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  azure:
+    needs: CICD
+    runs-on: ubuntu-latest
+    if: ${{ github.event_name != 'pull_request' }}
+    steps:
+      # here are instructions for minimally scoped auth https://github.com/Azure/webapps-container-deploy
+      - name: Log-in to Azure
+        uses: azure/login@v1.1
+        with:
+          creds: ${{ secrets.AZURE_CREDENTIALS }}

From 4cea5a92a03f9826ccbc40bb87404b13e138203c Mon Sep 17 00:00:00 2001
From: Maximilian Held <info@maxheld.de>
Date: Wed, 15 Jul 2020 17:19:41 +0200
Subject: [PATCH 04/46] also deploy

---
 .github/workflows/main.yaml | 6 ++++++
 1 file changed, 6 insertions(+)

diff --git a/.github/workflows/main.yaml b/.github/workflows/main.yaml
index 1caa4c0..5ae784a 100644
--- a/.github/workflows/main.yaml
+++ b/.github/workflows/main.yaml
@@ -64,3 +64,9 @@ jobs:
         uses: azure/login@v1.1
         with:
           creds: ${{ secrets.AZURE_CREDENTIALS }}
+      - name: Deploy to Azure Web Apps for Containers
+        uses: azure/webapps-deploy@v2
+        with:
+          app-name: hoad
+          uses: azure/webapps-deploy@v2
+          images: docker.pkg.github.com/${{ github.repository }}/hoad-dev:${{ github.ref }}

From cbefae36f0dfc94c70c5752e7bbfade6291bda27 Mon Sep 17 00:00:00 2001
From: Maximilian Held <info@maxheld.de>
Date: Wed, 15 Jul 2020 17:22:24 +0200
Subject: [PATCH 05/46] first log in to github pkg registry

---
 .github/workflows/main.yaml | 8 +++++++-
 1 file changed, 7 insertions(+), 1 deletion(-)

diff --git a/.github/workflows/main.yaml b/.github/workflows/main.yaml
index 5ae784a..e40075e 100644
--- a/.github/workflows/main.yaml
+++ b/.github/workflows/main.yaml
@@ -60,10 +60,16 @@ jobs:
     if: ${{ github.event_name != 'pull_request' }}
     steps:
       # here are instructions for minimally scoped auth https://github.com/Azure/webapps-container-deploy
-      - name: Log-in to Azure
+      - name: Log in to Azure
         uses: azure/login@v1.1
         with:
           creds: ${{ secrets.AZURE_CREDENTIALS }}
+      - name: Log in to GitHub Package Registry
+        uses: azure/docker-login@v1
+        with:
+          login-server: docker.pkg.github.com
+          username: ${{ github.actor }}
+          password: ${{ secrets.GITHUB_TOKEN }}
       - name: Deploy to Azure Web Apps for Containers
         uses: azure/webapps-deploy@v2
         with:

From 4856123f866fc5f7182af1e002c3fd3cea4a896c Mon Sep 17 00:00:00 2001
From: Maximilian Held <info@maxheld.de>
Date: Wed, 15 Jul 2020 17:26:16 +0200
Subject: [PATCH 06/46] poke ghactions

---
 .github/workflows/main.yaml | 3 +--
 1 file changed, 1 insertion(+), 2 deletions(-)

diff --git a/.github/workflows/main.yaml b/.github/workflows/main.yaml
index e40075e..09e0ddc 100644
--- a/.github/workflows/main.yaml
+++ b/.github/workflows/main.yaml
@@ -1,5 +1,4 @@
-on:
-  push:
+on: push
 
 jobs:
   CICD:

From d5d06447d37af30d5298d8a77ae9b6089b7ab7e2 Mon Sep 17 00:00:00 2001
From: Maximilian Held <info@maxheld.de>
Date: Thu, 16 Jul 2020 18:42:02 +0200
Subject: [PATCH 07/46] fix yaml

---
 .github/workflows/main.yaml | 1 -
 1 file changed, 1 deletion(-)

diff --git a/.github/workflows/main.yaml b/.github/workflows/main.yaml
index 09e0ddc..f2f749c 100644
--- a/.github/workflows/main.yaml
+++ b/.github/workflows/main.yaml
@@ -73,5 +73,4 @@ jobs:
         uses: azure/webapps-deploy@v2
         with:
           app-name: hoad
-          uses: azure/webapps-deploy@v2
           images: docker.pkg.github.com/${{ github.repository }}/hoad-dev:${{ github.ref }}

From 5a9e368db02060c68feb13cfbaed4d663f9b1516 Mon Sep 17 00:00:00 2001
From: Maximilian Held <info@maxheld.de>
Date: Thu, 16 Jul 2020 19:16:58 +0200
Subject: [PATCH 08/46] fix tag

---
 .github/workflows/main.yaml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/.github/workflows/main.yaml b/.github/workflows/main.yaml
index f2f749c..4abb4f0 100644
--- a/.github/workflows/main.yaml
+++ b/.github/workflows/main.yaml
@@ -73,4 +73,4 @@ jobs:
         uses: azure/webapps-deploy@v2
         with:
           app-name: hoad
-          images: docker.pkg.github.com/${{ github.repository }}/hoad-dev:${{ github.ref }}
+          images: docker.pkg.github.com/${{ github.repository }}/hoad-dev:azure

From 5e60c1570ca196ce1ec5fe05ff1650f3077a35da Mon Sep 17 00:00:00 2001
From: Maximilian Held <info@maxheld.de>
Date: Thu, 16 Jul 2020 19:43:00 +0200
Subject: [PATCH 09/46] set entrypoint and pkg.github.com creds #245

---
 .github/workflows/main.yaml | 23 +++++++++++++++++++++++
 1 file changed, 23 insertions(+)

diff --git a/.github/workflows/main.yaml b/.github/workflows/main.yaml
index 4abb4f0..e1f8689 100644
--- a/.github/workflows/main.yaml
+++ b/.github/workflows/main.yaml
@@ -69,8 +69,31 @@ jobs:
           login-server: docker.pkg.github.com
           username: ${{ github.actor }}
           password: ${{ secrets.GITHUB_TOKEN }}
+      - name: Auth Azure for GitHub Package Registry
+        uses: azure/appservice-settings@v1
+        with:
+          app-name: hoad
+          general-settings-json: |
+            [
+              {
+                  "name": "DOCKER_REGISTRY_SERVER_PASSWORD",
+                  "value": "${{ secrets.GITHUB_TOKEN }}",
+                  "slotSetting": false
+              },
+              {
+                  "name": "DOCKER_REGISTRY_SERVER_URL",
+                  "value": "https://docker.pkg.github.com",
+                  "slotSetting": false
+              },
+              {
+                  "name": "DOCKER_REGISTRY_SERVER_USERNAME",
+                  "value": "${{  github.actor  }}",
+                  "slotSetting": false
+              }
+            ]
       - name: Deploy to Azure Web Apps for Containers
         uses: azure/webapps-deploy@v2
         with:
           app-name: hoad
           images: docker.pkg.github.com/${{ github.repository }}/hoad-dev:azure
+          startup-command: Rscript -e "hoad::runHOAD(shiny_args = list(port = 80, host = '0.0.0.0'))"

From 13efdcc5436989e64ba7b2120b3d69374761b7db Mon Sep 17 00:00:00 2001
From: Maximilian Held <info@maxheld.de>
Date: Thu, 16 Jul 2020 19:56:42 +0200
Subject: [PATCH 10/46] just update app settings #245

---
 .github/workflows/main.yaml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/.github/workflows/main.yaml b/.github/workflows/main.yaml
index e1f8689..6a46c2b 100644
--- a/.github/workflows/main.yaml
+++ b/.github/workflows/main.yaml
@@ -73,7 +73,7 @@ jobs:
         uses: azure/appservice-settings@v1
         with:
           app-name: hoad
-          general-settings-json: |
+          app-settings-json: |
             [
               {
                   "name": "DOCKER_REGISTRY_SERVER_PASSWORD",

From 00ba9abd53624a3945bceb4dbf029cce2b6a2512 Mon Sep 17 00:00:00 2001
From: Maximilian Held <info@maxheld.de>
Date: Thu, 16 Jul 2020 20:18:37 +0200
Subject: [PATCH 11/46] fix image name

---
 .github/workflows/main.yaml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/.github/workflows/main.yaml b/.github/workflows/main.yaml
index 6a46c2b..fbddab0 100644
--- a/.github/workflows/main.yaml
+++ b/.github/workflows/main.yaml
@@ -95,5 +95,5 @@ jobs:
         uses: azure/webapps-deploy@v2
         with:
           app-name: hoad
-          images: docker.pkg.github.com/${{ github.repository }}/hoad-dev:azure
+          images: ${{ github.repository }}/hoad-dev:azure
           startup-command: Rscript -e "hoad::runHOAD(shiny_args = list(port = 80, host = '0.0.0.0'))"

From 2385b720743832942c5f2e98aa9e5561bd2bda46 Mon Sep 17 00:00:00 2001
From: Maximilian Held <info@maxheld.de>
Date: Thu, 16 Jul 2020 22:32:49 +0200
Subject: [PATCH 12/46] try out deploy

---
 .github/workflows/main.yaml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/.github/workflows/main.yaml b/.github/workflows/main.yaml
index fbddab0..22c3355 100644
--- a/.github/workflows/main.yaml
+++ b/.github/workflows/main.yaml
@@ -48,7 +48,7 @@ jobs:
           add_git_labels: true
           push: ${{ github.event_name != 'pull_request' }}
       - name: Deploy to GitHub Pages
-        if: github.ref == 'refs/heads/master'
+        # if: github.ref == 'refs/heads/master'
         uses: maxheld83/ghpages@github-token
         env:
           BUILD_DIR: docs

From d80acb7346dfb7263c1f6d4a34a12b578f039454 Mon Sep 17 00:00:00 2001
From: Maximilian Held <info@maxheld.de>
Date: Fri, 17 Jul 2020 18:18:22 +0200
Subject: [PATCH 13/46] add init.sh for azure #245

---
 .Rbuildignore | 1 +
 .dockerignore | 1 +
 Dockerfile    | 4 ++++
 init.sh       | 4 ++++
 4 files changed, 10 insertions(+)
 create mode 100755 init.sh

diff --git a/.Rbuildignore b/.Rbuildignore
index a7a8699..ed262cf 100644
--- a/.Rbuildignore
+++ b/.Rbuildignore
@@ -17,3 +17,4 @@ hoad.code-workspace
 ^R/.scoap\.R$
 ^R/.unpaywall_integration\.R$
 .vscode
+init.sh
diff --git a/.dockerignore b/.dockerignore
index 9226438..3dc2e48 100644
--- a/.dockerignore
+++ b/.dockerignore
@@ -6,3 +6,4 @@
 !/NAMESPACE
 !/LICENSE.md
 !/.Rbuildignore
+!/init.sh
diff --git a/Dockerfile b/Dockerfile
index 5ea4d89..a9985d3 100644
--- a/Dockerfile
+++ b/Dockerfile
@@ -1 +1,5 @@
 FROM subugoe/muggle-onbuild:f60004c31979947dab53fbf9cfbb0e7f1c4bea55
+COPY init.sh /usr/local/bin/
+# TODO this can move inside of the copy command once that feature goes mainline in docker
+RUN ["sh", "-c", "chmod u+x /usr/local/bin/init.sh"]
+EXPOSE 80
diff --git a/init.sh b/init.sh
new file mode 100755
index 0000000..4f8c311
--- /dev/null
+++ b/init.sh
@@ -0,0 +1,4 @@
+#!/usr/bin/env bash
+set -e
+
+Rscript -e "hoad::runHOAD(shiny_args = list(port = 80, host = '0.0.0.0'))"

From 6b4f5c55ca8b5188d2ea8eef402f445a950312bc Mon Sep 17 00:00:00 2001
From: Maximilian Held <info@maxheld.de>
Date: Mon, 20 Jul 2020 15:52:04 +0200
Subject: [PATCH 14/46] auth against azure

---
 .Rbuildignore               |  2 +-
 .azure/azure.sh             | 11 +++++++++++
 init.sh => .azure/init.sh   |  0
 .dockerignore               |  2 +-
 .github/workflows/main.yaml | 38 +++----------------------------------
 Dockerfile                  |  2 +-
 man/path_extdat.Rd          |  2 +-
 7 files changed, 18 insertions(+), 39 deletions(-)
 create mode 100644 .azure/azure.sh
 rename init.sh => .azure/init.sh (100%)

diff --git a/.Rbuildignore b/.Rbuildignore
index ed262cf..1971e5e 100644
--- a/.Rbuildignore
+++ b/.Rbuildignore
@@ -17,4 +17,4 @@ hoad.code-workspace
 ^R/.scoap\.R$
 ^R/.unpaywall_integration\.R$
 .vscode
-init.sh
+.azure
diff --git a/.azure/azure.sh b/.azure/azure.sh
new file mode 100644
index 0000000..d1381fe
--- /dev/null
+++ b/.azure/azure.sh
@@ -0,0 +1,11 @@
+SUBSCRIPTION_ID="f0dd3a37-0a4e-4e7f-9c9b-cb9f60146edc"
+RESOURCE_GROUP="hoad"
+
+# script to set up privilege json, stored on GitHub as a AZURE_CREDENTIALS secret
+# https://github.com/Azure/login
+# here are instructions for minimally scoped auth https://github.com/Azure/webapps-container-deploy
+az ad sp create-for-rbac \
+  --name "https://github.com/subugoe/hoad" \
+  --role contributor \
+  --scopes /subscriptions/$SUBSCRIPTION_ID/resourceGroups/$RESOURCE_GROUP \
+  --sdk-auth
diff --git a/init.sh b/.azure/init.sh
similarity index 100%
rename from init.sh
rename to .azure/init.sh
diff --git a/.dockerignore b/.dockerignore
index 3dc2e48..03ea293 100644
--- a/.dockerignore
+++ b/.dockerignore
@@ -6,4 +6,4 @@
 !/NAMESPACE
 !/LICENSE.md
 !/.Rbuildignore
-!/init.sh
+!/.azure/init.sh
diff --git a/.github/workflows/main.yaml b/.github/workflows/main.yaml
index 22c3355..69dbfb9 100644
--- a/.github/workflows/main.yaml
+++ b/.github/workflows/main.yaml
@@ -58,42 +58,10 @@ jobs:
     runs-on: ubuntu-latest
     if: ${{ github.event_name != 'pull_request' }}
     steps:
-      # here are instructions for minimally scoped auth https://github.com/Azure/webapps-container-deploy
       - name: Log in to Azure
         uses: azure/login@v1.1
         with:
           creds: ${{ secrets.AZURE_CREDENTIALS }}
-      - name: Log in to GitHub Package Registry
-        uses: azure/docker-login@v1
-        with:
-          login-server: docker.pkg.github.com
-          username: ${{ github.actor }}
-          password: ${{ secrets.GITHUB_TOKEN }}
-      - name: Auth Azure for GitHub Package Registry
-        uses: azure/appservice-settings@v1
-        with:
-          app-name: hoad
-          app-settings-json: |
-            [
-              {
-                  "name": "DOCKER_REGISTRY_SERVER_PASSWORD",
-                  "value": "${{ secrets.GITHUB_TOKEN }}",
-                  "slotSetting": false
-              },
-              {
-                  "name": "DOCKER_REGISTRY_SERVER_URL",
-                  "value": "https://docker.pkg.github.com",
-                  "slotSetting": false
-              },
-              {
-                  "name": "DOCKER_REGISTRY_SERVER_USERNAME",
-                  "value": "${{  github.actor  }}",
-                  "slotSetting": false
-              }
-            ]
-      - name: Deploy to Azure Web Apps for Containers
-        uses: azure/webapps-deploy@v2
-        with:
-          app-name: hoad
-          images: ${{ github.repository }}/hoad-dev:azure
-          startup-command: Rscript -e "hoad::runHOAD(shiny_args = list(port = 80, host = '0.0.0.0'))"
+      - name: test
+        run: |
+          az webapp list --query "[?state=='Running']"
diff --git a/Dockerfile b/Dockerfile
index a9985d3..b216aaf 100644
--- a/Dockerfile
+++ b/Dockerfile
@@ -1,5 +1,5 @@
 FROM subugoe/muggle-onbuild:f60004c31979947dab53fbf9cfbb0e7f1c4bea55
-COPY init.sh /usr/local/bin/
+COPY .azure/init.sh /usr/local/bin/
 # TODO this can move inside of the copy command once that feature goes mainline in docker
 RUN ["sh", "-c", "chmod u+x /usr/local/bin/init.sh"]
 EXPOSE 80
diff --git a/man/path_extdat.Rd b/man/path_extdat.Rd
index 6a35761..e62cc76 100644
--- a/man/path_extdat.Rd
+++ b/man/path_extdat.Rd
@@ -10,7 +10,7 @@ path_extdat(x)
 \item{x}{\verb{[character(1)]} giving the filename or path to the file from \verb{inst/extdata/}}
 }
 \value{
-\verb{[character(1)]} giving the absolute path to \code{x}, as returned by \code{\link[fs:path_abs]{fs::path_abs()}}.
+\verb{[character(1)]} giving the absolute path to \code{x}, as returned by \code{\link[fs:path_math]{fs::path_abs()}}.
 }
 \description{
 Looks for \verb{inst/} in the working directory, otherwise wraps \code{\link[fs:path_package]{fs::path_package()}} with appropriate defaults for this package.

From b2cb999c8271e10301a9d3100a503397feff69df Mon Sep 17 00:00:00 2001
From: Maximilian Held <info@maxheld.de>
Date: Mon, 20 Jul 2020 21:30:28 +0200
Subject: [PATCH 15/46] deploy to azure programmatically #245

---
 .azure/azure.sh             | 11 --------
 .azure/deploy.sh            | 51 +++++++++++++++++++++++++++++++++++++
 .github/workflows/main.yaml |  5 ++--
 3 files changed, 53 insertions(+), 14 deletions(-)
 delete mode 100644 .azure/azure.sh
 create mode 100755 .azure/deploy.sh

diff --git a/.azure/azure.sh b/.azure/azure.sh
deleted file mode 100644
index d1381fe..0000000
--- a/.azure/azure.sh
+++ /dev/null
@@ -1,11 +0,0 @@
-SUBSCRIPTION_ID="f0dd3a37-0a4e-4e7f-9c9b-cb9f60146edc"
-RESOURCE_GROUP="hoad"
-
-# script to set up privilege json, stored on GitHub as a AZURE_CREDENTIALS secret
-# https://github.com/Azure/login
-# here are instructions for minimally scoped auth https://github.com/Azure/webapps-container-deploy
-az ad sp create-for-rbac \
-  --name "https://github.com/subugoe/hoad" \
-  --role contributor \
-  --scopes /subscriptions/$SUBSCRIPTION_ID/resourceGroups/$RESOURCE_GROUP \
-  --sdk-auth
diff --git a/.azure/deploy.sh b/.azure/deploy.sh
new file mode 100755
index 0000000..b937acf
--- /dev/null
+++ b/.azure/deploy.sh
@@ -0,0 +1,51 @@
+#!/usr/bin/env bash
+set -e
+
+SUBSCRIPTION_ID="f0dd3a37-0a4e-4e7f-9c9b-cb9f60146edc"
+RESOURCE_GROUP="hoad"
+WEBAPP_NAME="hoad"
+IMAGE_TAG="azure"
+
+# script to set up privilege json, stored on GitHub as a AZURE_CREDENTIALS secret
+# https://github.com/Azure/login
+# here are instructions for minimally scoped auth https://github.com/Azure/webapps-container-deploy
+# az ad sp create-for-rbac \
+#   --name "https://github.com/subugoe/hoad" \
+#   --role contributor \
+#   --scopes /subscriptions/$SUBSCRIPTION_ID/resourceGroups/$RESOURCE_GROUP \
+#   --sdk-auth
+
+echo "Setting defaults ..."
+az account set --subscription $SUBSCRIPTION_ID
+az configure \
+  --defaults group=$RESOURCE_GROUP web=$WEBAPP_NAME
+
+echo "Enabling arr client affinity ..."
+# for some reason, this is not part of the webapp config, though it is on portal.azure.com
+az webapp update \
+  --client-affinity-enabled true
+
+echo "Setting web app configuration ..."
+az webapp config set \
+  --always-on true \
+  --ftps-state disabled \
+  --web-sockets-enabled true \
+  --http20-enabled false \
+  --startup-file init.sh
+
+echo "Setting container configuration ..."
+az webapp config container set \
+  --docker-custom-image-name docker.pkg.github.com/subugoe/hoad/hoad-dev:$IMAGE_TAG \
+  --docker-registry-server-url https://docker.pkg.github.com \
+  --docker-registry-server-user maxheld83 \
+  --enable-app-service-storage false
+# DOCKER_REGISTRY_SERVER_PASSWORD is a GH PAT set on portal.azure.com
+
+echo "Disable Docker CI ..."
+# weirdly this cannot be set in the above
+az webapp config appsettings set \
+  --settings DOCKER_ENABLE_CI=false
+
+# TODO might not be necessary
+echo "Restarting web app ..."
+az webapp restart
diff --git a/.github/workflows/main.yaml b/.github/workflows/main.yaml
index 69dbfb9..ce45557 100644
--- a/.github/workflows/main.yaml
+++ b/.github/workflows/main.yaml
@@ -62,6 +62,5 @@ jobs:
         uses: azure/login@v1.1
         with:
           creds: ${{ secrets.AZURE_CREDENTIALS }}
-      - name: test
-        run: |
-          az webapp list --query "[?state=='Running']"
+      - name: Deploy to Azure
+        run: .azure/deploy.sh

From dc1af997723390bfd7763d06898e08ce58030afc Mon Sep 17 00:00:00 2001
From: Maximilian Held <info@maxheld.de>
Date: Mon, 20 Jul 2020 21:42:19 +0200
Subject: [PATCH 16/46] checkout for azure #245

---
 .github/workflows/main.yaml | 1 +
 1 file changed, 1 insertion(+)

diff --git a/.github/workflows/main.yaml b/.github/workflows/main.yaml
index ce45557..e1f4a4e 100644
--- a/.github/workflows/main.yaml
+++ b/.github/workflows/main.yaml
@@ -58,6 +58,7 @@ jobs:
     runs-on: ubuntu-latest
     if: ${{ github.event_name != 'pull_request' }}
     steps:
+      - uses: actions/checkout@v2
       - name: Log in to Azure
         uses: azure/login@v1.1
         with:

From 362d1685492b4876482662b30963457951cd573f Mon Sep 17 00:00:00 2001
From: Maximilian Held <info@maxheld.de>
Date: Tue, 21 Jul 2020 09:21:11 +0200
Subject: [PATCH 17/46] test changes to dashboard on azure #245

---
 inst/app/dashboard.Rmd | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/inst/app/dashboard.Rmd b/inst/app/dashboard.Rmd
index bc6e64f..10badd0 100644
--- a/inst/app/dashboard.Rmd
+++ b/inst/app/dashboard.Rmd
@@ -124,7 +124,7 @@ if (length(unique(jn_f()$publisher)) > 1) {
 # })
 ```
 
-Notice that only those hybrid open access journals were included where
+Notice we here only include those hybrid open access journals were included where
 academic institutions sponsored the open access publication according to the [Open APC initiative](https://github.com/openapc/openapc-de)
 and where publishers shared license information about immediate open access with [Crossref](https://github.com/CrossRef/rest-api-doc).
 

From caa5c925db1e2fb307219c03457ce0d60ce83032 Mon Sep 17 00:00:00 2001
From: Maximilian Held <info@maxheld.de>
Date: Tue, 21 Jul 2020 09:28:18 +0200
Subject: [PATCH 18/46] embed shiny on azure in pkgdown #245

---
 vignettes/interactive.Rmd | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/vignettes/interactive.Rmd b/vignettes/interactive.Rmd
index 57a2213..30ab994 100644
--- a/vignettes/interactive.Rmd
+++ b/vignettes/interactive.Rmd
@@ -29,6 +29,6 @@ footer{
 <!-- TODO this needs to be updated manually, until https://github.com/subugoe/hoad/issues/180 -->
 
 <div class="shiny-app-frame">
-<iframe id="2343078" src="https://subugoe.shinyapps.io/hoad-refs-heads-refactor-as-pkg/">
+<iframe src="http://hoad.azurewebsites.net">
 </iframe>
 </div>

From 9278766eb994b9a84f6ed35c751287b6810e582a Mon Sep 17 00:00:00 2001
From: Maximilian Held <info@maxheld.de>
Date: Tue, 21 Jul 2020 18:39:31 +0200
Subject: [PATCH 19/46] only push to ghpages from master

---
 .github/workflows/main.yaml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/.github/workflows/main.yaml b/.github/workflows/main.yaml
index e1f4a4e..e294499 100644
--- a/.github/workflows/main.yaml
+++ b/.github/workflows/main.yaml
@@ -48,7 +48,7 @@ jobs:
           add_git_labels: true
           push: ${{ github.event_name != 'pull_request' }}
       - name: Deploy to GitHub Pages
-        # if: github.ref == 'refs/heads/master'
+        if: github.ref == 'refs/heads/master'
         uses: maxheld83/ghpages@github-token
         env:
           BUILD_DIR: docs

From 502e2c388dc21abfc7ae49dc3305fefcf05d0804 Mon Sep 17 00:00:00 2001
From: Maximilian Held <info@maxheld.de>
Date: Mon, 17 Aug 2020 23:43:35 +0200
Subject: [PATCH 20/46] upgrade hoad to shinycaas and muggle

---
 .azure/deploy.sh            | 51 -------------------------------------
 .azure/init.sh              |  4 ---
 .github/workflows/main.yaml | 51 ++++++++++++++++++++++++-------------
 Dockerfile                  |  9 +++----
 pkgdown/_pkgdown.yml        |  1 +
 vignettes/interactive.Rmd   | 33 +++---------------------
 6 files changed, 42 insertions(+), 107 deletions(-)
 delete mode 100755 .azure/deploy.sh
 delete mode 100755 .azure/init.sh

diff --git a/.azure/deploy.sh b/.azure/deploy.sh
deleted file mode 100755
index b937acf..0000000
--- a/.azure/deploy.sh
+++ /dev/null
@@ -1,51 +0,0 @@
-#!/usr/bin/env bash
-set -e
-
-SUBSCRIPTION_ID="f0dd3a37-0a4e-4e7f-9c9b-cb9f60146edc"
-RESOURCE_GROUP="hoad"
-WEBAPP_NAME="hoad"
-IMAGE_TAG="azure"
-
-# script to set up privilege json, stored on GitHub as a AZURE_CREDENTIALS secret
-# https://github.com/Azure/login
-# here are instructions for minimally scoped auth https://github.com/Azure/webapps-container-deploy
-# az ad sp create-for-rbac \
-#   --name "https://github.com/subugoe/hoad" \
-#   --role contributor \
-#   --scopes /subscriptions/$SUBSCRIPTION_ID/resourceGroups/$RESOURCE_GROUP \
-#   --sdk-auth
-
-echo "Setting defaults ..."
-az account set --subscription $SUBSCRIPTION_ID
-az configure \
-  --defaults group=$RESOURCE_GROUP web=$WEBAPP_NAME
-
-echo "Enabling arr client affinity ..."
-# for some reason, this is not part of the webapp config, though it is on portal.azure.com
-az webapp update \
-  --client-affinity-enabled true
-
-echo "Setting web app configuration ..."
-az webapp config set \
-  --always-on true \
-  --ftps-state disabled \
-  --web-sockets-enabled true \
-  --http20-enabled false \
-  --startup-file init.sh
-
-echo "Setting container configuration ..."
-az webapp config container set \
-  --docker-custom-image-name docker.pkg.github.com/subugoe/hoad/hoad-dev:$IMAGE_TAG \
-  --docker-registry-server-url https://docker.pkg.github.com \
-  --docker-registry-server-user maxheld83 \
-  --enable-app-service-storage false
-# DOCKER_REGISTRY_SERVER_PASSWORD is a GH PAT set on portal.azure.com
-
-echo "Disable Docker CI ..."
-# weirdly this cannot be set in the above
-az webapp config appsettings set \
-  --settings DOCKER_ENABLE_CI=false
-
-# TODO might not be necessary
-echo "Restarting web app ..."
-az webapp restart
diff --git a/.azure/init.sh b/.azure/init.sh
deleted file mode 100755
index 4f8c311..0000000
--- a/.azure/init.sh
+++ /dev/null
@@ -1,4 +0,0 @@
-#!/usr/bin/env bash
-set -e
-
-Rscript -e "hoad::runHOAD(shiny_args = list(port = 80, host = '0.0.0.0'))"
diff --git a/.github/workflows/main.yaml b/.github/workflows/main.yaml
index 4730c7d..780a3b2 100644
--- a/.github/workflows/main.yaml
+++ b/.github/workflows/main.yaml
@@ -8,7 +8,7 @@ jobs:
         shell: Rscript {0}
     container:
       # this needs to be the same as in Dockerfile
-      image: subugoe/muggle-onbuild:f60004c31979947dab53fbf9cfbb0e7f1c4bea55
+      image: subugoe/muggle-runtime-onbuild:9acfa4d9633250bdb85de69a803d426ecb7a14a1
     steps:
       - uses: actions/checkout@v2
       - name: Cache R Packages
@@ -22,7 +22,7 @@ jobs:
       - name: Install R Dependencies
         env:
           # see builder.Dockerfile for explanation, this resets after this step
-          R_LIBS_SITE: $R_LIBS_APP_GH
+          R_LIBS_SITE: $R_LIBS_RUNTIME_GH
         run: remotes::install_deps(dependencies = TRUE)
       - name: Check
         run: muggle::rcmdcheck2()
@@ -33,10 +33,11 @@ jobs:
           # extra step is necessary to build index.md to integrate readme and landing page
           rmarkdown::render("pkgdown/index.Rmd")
           pkgdown::build_site(override = list(new_process = FALSE))
-      - uses: docker/build-push-action@v1
-        name: Build Dev Image
+      - name: Build Buildtime Image
+        uses: docker/build-push-action@v1
         with:
-          repository: ${{ github.repository }}/hoad-dev
+          repository: ${{ github.repository }}/hoad-buildtime
+          target: buildtime
           username: ${{ github.actor }}
           password: ${{ secrets.GITHUB_TOKEN }}
           registry: docker.pkg.github.com
@@ -47,21 +48,37 @@ jobs:
           tags: ${{ github.sha }}
           add_git_labels: true
           push: ${{ github.event_name != 'pull_request' }}
+      - name: Build Runtime Image
+        uses: docker/build-push-action@v1
+        with:
+          repository: ${{ github.repository }}/hoad-runtime
+          target: buildtime
+          username: ${{ github.actor }}
+          password: ${{ secrets.GITHUB_TOKEN }}
+          registry: docker.pkg.github.com
+          # this will set "latest" if master as per https://github.com/docker/build-push-action
+          tag_with_ref: true
+          # we're relying on long shas only to keep things easy
+          tag_with_sha: false
+          tags: ${{ github.sha }}
+          add_git_labels: true
+          push: ${{ github.event_name != 'pull_request' }}
+      - name: Log in to Azure
+        uses: azure/login@v1.1
+        with:
+          creds: ${{ secrets.AZURE_CREDENTIALS }}
+      - name: Deploy to Azure
+        run: |
+          shinycaas::az_webapp_config(
+            name = "hoad",
+            deployment_container_image_name = "docker.pkg.github.com/subugoe/shinycaas/oldfaithful:${{ github.sha }}",
+            plan = "hoad",
+            resource_group = "hoad",
+            subscription = "f0dd3a37-0a4e-4e7f-9c9b-cb9f60146edc"
+          )
       - name: Deploy to GitHub Pages
         if: github.ref == 'refs/heads/master'
         uses: maxheld83/ghpages@github-token
         env:
           BUILD_DIR: docs
           GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  azure:
-    needs: CICD
-    runs-on: ubuntu-latest
-    if: ${{ github.event_name != 'pull_request' }}
-    steps:
-      - uses: actions/checkout@v2
-      - name: Log in to Azure
-        uses: azure/login@v1.1
-        with:
-          creds: ${{ secrets.AZURE_CREDENTIALS }}
-      - name: Deploy to Azure
-        run: .azure/deploy.sh
diff --git a/Dockerfile b/Dockerfile
index b216aaf..5db956d 100644
--- a/Dockerfile
+++ b/Dockerfile
@@ -1,5 +1,4 @@
-FROM subugoe/muggle-onbuild:f60004c31979947dab53fbf9cfbb0e7f1c4bea55
-COPY .azure/init.sh /usr/local/bin/
-# TODO this can move inside of the copy command once that feature goes mainline in docker
-RUN ["sh", "-c", "chmod u+x /usr/local/bin/init.sh"]
-EXPOSE 80
+ARG MUGGLE_TAG=9acfa4d9633250bdb85de69a803d426ecb7a14a1
+FROM subugoe/muggle-buildtime-onbuild:${MUGGLE_TAG} as buildtime
+FROM subugoe/muggle-runtime-onbuild:${MUGGLE_TAG} as runtime
+CMD shinycaas::az_webapp_shiny_opts(); hoad::runHOAD()
diff --git a/pkgdown/_pkgdown.yml b/pkgdown/_pkgdown.yml
index 0acde19..305051b 100644
--- a/pkgdown/_pkgdown.yml
+++ b/pkgdown/_pkgdown.yml
@@ -1,3 +1,4 @@
+url: https://subugoe.github.io/hoad/
 authors:
   Najko Jahn:
     href: https://www.sub.uni-goettingen.de/kontakt/personen-a-z/personendetails/person/najko-jahn/
diff --git a/vignettes/interactive.Rmd b/vignettes/interactive.Rmd
index 30ab994..f32617f 100644
--- a/vignettes/interactive.Rmd
+++ b/vignettes/interactive.Rmd
@@ -2,33 +2,6 @@
 title: "Interactive Dashboard"
 ---
 
-<style>
-.shiny-app-frame {
-  margin-top: 50px;
-  position: fixed;
-  left: 0;
-  top: 0;
-  bottom: 0;
-  right: 0;
-}
-.shiny-app-frame iframe {
-  width: 100%;
-  height: 100%;
-  border: none;
-}
-/* must be hidden otherwise it gets overlaid over the app */
-footer{
-  visibility: hidden
-}
-.page-header{
-  visibility: hidden
-}
-</style>
-
-
-<!-- TODO this needs to be updated manually, until https://github.com/subugoe/hoad/issues/180 -->
-
-<div class="shiny-app-frame">
-<iframe src="http://hoad.azurewebsites.net">
-</iframe>
-</div>
+```{r echo=FALSE}
+shinycaas::include_app2("https://hoad.azurewebsites.net")
+```

From 31314c0c91dc24ec7636821b3c88a902e34fbc47 Mon Sep 17 00:00:00 2001
From: Maximilian Held <info@maxheld.de>
Date: Mon, 17 Aug 2020 23:53:18 +0200
Subject: [PATCH 21/46] fix container

---
 .github/workflows/main.yaml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/.github/workflows/main.yaml b/.github/workflows/main.yaml
index 780a3b2..1774260 100644
--- a/.github/workflows/main.yaml
+++ b/.github/workflows/main.yaml
@@ -8,7 +8,7 @@ jobs:
         shell: Rscript {0}
     container:
       # this needs to be the same as in Dockerfile
-      image: subugoe/muggle-runtime-onbuild:9acfa4d9633250bdb85de69a803d426ecb7a14a1
+      image: subugoe/muggle-buildtime-onbuild:9acfa4d9633250bdb85de69a803d426ecb7a14a1
     steps:
       - uses: actions/checkout@v2
       - name: Cache R Packages

From 09177df3e10a42db7b9aad39cf7ec16458e801b2 Mon Sep 17 00:00:00 2001
From: Maximilian Held <info@maxheld.de>
Date: Thu, 20 Aug 2020 18:55:56 +0200
Subject: [PATCH 22/46] factor out more deploy stuff

---
 .github/workflows/main.yaml | 18 ++++++++++++------
 Dockerfile                  |  2 +-
 2 files changed, 13 insertions(+), 7 deletions(-)

diff --git a/.github/workflows/main.yaml b/.github/workflows/main.yaml
index 1774260..aab0425 100644
--- a/.github/workflows/main.yaml
+++ b/.github/workflows/main.yaml
@@ -8,7 +8,7 @@ jobs:
         shell: Rscript {0}
     container:
       # this needs to be the same as in Dockerfile
-      image: subugoe/muggle-buildtime-onbuild:9acfa4d9633250bdb85de69a803d426ecb7a14a1
+      image: subugoe/muggle-buildtime-onbuild:a7876ed9ad79909bcf8ff04d1d8c30503bdb8b0a
     steps:
       - uses: actions/checkout@v2
       - name: Cache R Packages
@@ -52,7 +52,7 @@ jobs:
         uses: docker/build-push-action@v1
         with:
           repository: ${{ github.repository }}/hoad-runtime
-          target: buildtime
+          target: runtime
           username: ${{ github.actor }}
           password: ${{ secrets.GITHUB_TOKEN }}
           registry: docker.pkg.github.com
@@ -67,11 +67,11 @@ jobs:
         uses: azure/login@v1.1
         with:
           creds: ${{ secrets.AZURE_CREDENTIALS }}
-      - name: Deploy to Azure
+      - name: Deploy to Azure Webapps
+        env:
+          GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
         run: |
-          shinycaas::az_webapp_config(
-            name = "hoad",
-            deployment_container_image_name = "docker.pkg.github.com/subugoe/shinycaas/oldfaithful:${{ github.sha }}",
+          muggle::az_webapp_config_muggle(
             plan = "hoad",
             resource_group = "hoad",
             subscription = "f0dd3a37-0a4e-4e7f-9c9b-cb9f60146edc"
@@ -82,3 +82,9 @@ jobs:
         env:
           BUILD_DIR: docs
           GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  sleep:
+    name: Sleep to let GITHUB_TOKEN persist
+    needs: CICD
+    runs-on: ubuntu-20.04
+    steps:
+      - run: sleep 3m
diff --git a/Dockerfile b/Dockerfile
index 5db956d..85cf412 100644
--- a/Dockerfile
+++ b/Dockerfile
@@ -1,4 +1,4 @@
-ARG MUGGLE_TAG=9acfa4d9633250bdb85de69a803d426ecb7a14a1
+ARG MUGGLE_TAG=a7876ed9ad79909bcf8ff04d1d8c30503bdb8b0a
 FROM subugoe/muggle-buildtime-onbuild:${MUGGLE_TAG} as buildtime
 FROM subugoe/muggle-runtime-onbuild:${MUGGLE_TAG} as runtime
 CMD shinycaas::az_webapp_shiny_opts(); hoad::runHOAD()

From e981ac24a3e48b2dc48fbd30a70f3088f752d84a Mon Sep 17 00:00:00 2001
From: Maximilian Held <info@maxheld.de>
Date: Thu, 20 Aug 2020 19:35:21 +0200
Subject: [PATCH 23/46] invalidate cache and remove rsconnect

---
 DESCRIPTION | 1 -
 1 file changed, 1 deletion(-)

diff --git a/DESCRIPTION b/DESCRIPTION
index c8dfe49..64b2290 100644
--- a/DESCRIPTION
+++ b/DESCRIPTION
@@ -69,7 +69,6 @@ Suggests:
     lubridate,
     modelr,
     reprex,
-    rsconnect,
     rvest,
     selectr,
     httr,

From c9c7ecc873ffd882b957b197256cf908c495e14c Mon Sep 17 00:00:00 2001
From: Maximilian Held <info@maxheld.de>
Date: Thu, 20 Aug 2020 19:41:04 +0200
Subject: [PATCH 24/46] migrate to subugoetheme

---
 DESCRIPTION          | 6 +++---
 pkgdown/_pkgdown.yml | 2 +-
 2 files changed, 4 insertions(+), 4 deletions(-)

diff --git a/DESCRIPTION b/DESCRIPTION
index 64b2290..b41f685 100644
--- a/DESCRIPTION
+++ b/DESCRIPTION
@@ -62,7 +62,6 @@ Suggests:
     DT,
     writexl,
     echarts4r,
-    metar,
     DBI,
     dbplyr,
     haven,
@@ -74,7 +73,8 @@ Suggests:
     httr,
     purrr,
     covr,
-    testthat
+    testthat,
+    subugoetheme
 URL: https://subugoe.github.io/hoad, https://github.com/subugoe/hoad/
 BugReports: https://github.com/subugoe/hoad/issues
 RoxygenNote: 7.1.1
@@ -87,4 +87,4 @@ Imports:
     ggplot2,
     rlang
 Remotes:
-    subugoe/metar@7ccc2a0
+    subugoe/subugoetheme@1.0.0
diff --git a/pkgdown/_pkgdown.yml b/pkgdown/_pkgdown.yml
index 305051b..c8f472c 100644
--- a/pkgdown/_pkgdown.yml
+++ b/pkgdown/_pkgdown.yml
@@ -18,7 +18,7 @@ authors:
     href: https://github.com/openapc
     html: <img src="reference/figures/openAPC_01+.png" height="15">
 template:
-  package: metar
+  package: subugoetheme
   opengraph:
     twitter:
       site: "@subugoe"

From 2eb6c7596726ab9c95f6fa31b80514874317170b Mon Sep 17 00:00:00 2001
From: Maximilian Held <info@maxheld.de>
Date: Thu, 20 Aug 2020 20:19:38 +0200
Subject: [PATCH 25/46] hard-code hoad

---
 .github/workflows/main.yaml | 1 +
 1 file changed, 1 insertion(+)

diff --git a/.github/workflows/main.yaml b/.github/workflows/main.yaml
index aab0425..9f12ed9 100644
--- a/.github/workflows/main.yaml
+++ b/.github/workflows/main.yaml
@@ -72,6 +72,7 @@ jobs:
           GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
         run: |
           muggle::az_webapp_config_muggle(
+            name = "hoad",
             plan = "hoad",
             resource_group = "hoad",
             subscription = "f0dd3a37-0a4e-4e7f-9c9b-cb9f60146edc"

From b531ec48a771f405b49a1cb444a2b7c384961695 Mon Sep 17 00:00:00 2001
From: Maximilian Held <info@maxheld.de>
Date: Thu, 20 Aug 2020 20:57:59 +0200
Subject: [PATCH 26/46] try fresh run

---
 .github/workflows/main.yaml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/.github/workflows/main.yaml b/.github/workflows/main.yaml
index 9f12ed9..d54a9e9 100644
--- a/.github/workflows/main.yaml
+++ b/.github/workflows/main.yaml
@@ -88,4 +88,4 @@ jobs:
     needs: CICD
     runs-on: ubuntu-20.04
     steps:
-      - run: sleep 3m
+      - run: sleep 2m

From 3f53e3e7fde41c9d83f6471c46a06de0f531dc8a Mon Sep 17 00:00:00 2001
From: Maximilian Held <info@maxheld.de>
Date: Fri, 21 Aug 2020 14:01:59 +0200
Subject: [PATCH 27/46] upgrade muggle

---
 .github/workflows/main.yaml | 26 +++++++++++---------------
 Dockerfile                  |  2 +-
 2 files changed, 12 insertions(+), 16 deletions(-)

diff --git a/.github/workflows/main.yaml b/.github/workflows/main.yaml
index d54a9e9..8cb094e 100644
--- a/.github/workflows/main.yaml
+++ b/.github/workflows/main.yaml
@@ -6,9 +6,13 @@ jobs:
     defaults:
       run:
         shell: Rscript {0}
+    env:
+      # update muggle here
+      MUGGLE_TAG: "9ee02c2d9b32cab07681288de9995dc3d4124e4d"
+      MUGGLE_PKG_NAME: ${{ github.event.repository.name }}
+      GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
     container:
-      # this needs to be the same as in Dockerfile
-      image: subugoe/muggle-buildtime-onbuild:a7876ed9ad79909bcf8ff04d1d8c30503bdb8b0a
+      image: subugoe/muggle-buildtime-onbuild:{{ env.MUGGLE_TAG }}
     steps:
       - uses: actions/checkout@v2
       - name: Cache R Packages
@@ -25,7 +29,7 @@ jobs:
           R_LIBS_SITE: $R_LIBS_RUNTIME_GH
         run: remotes::install_deps(dependencies = TRUE)
       - name: Check
-        run: muggle::rcmdcheck2()
+        run: devtools::check()
       - name: Test Coverage
         run: covr::codecov()
       - name: Build Package Website
@@ -36,8 +40,9 @@ jobs:
       - name: Build Buildtime Image
         uses: docker/build-push-action@v1
         with:
-          repository: ${{ github.repository }}/hoad-buildtime
+          repository: ${{ github.repository }}/{{ env.MUGGLE_PKG_NAME }}-buildtime
           target: buildtime
+          build_args: MUGGLE_TAG=${{ env.MUGGLE_TAG }}
           username: ${{ github.actor }}
           password: ${{ secrets.GITHUB_TOKEN }}
           registry: docker.pkg.github.com
@@ -51,8 +56,9 @@ jobs:
       - name: Build Runtime Image
         uses: docker/build-push-action@v1
         with:
-          repository: ${{ github.repository }}/hoad-runtime
+          repository: ${{ github.repository }}/{{ env.MUGGLE_PKG_NAME }}-runtime
           target: runtime
+          build_args: MUGGLE_TAG=${{ env.MUGGLE_TAG }}
           username: ${{ github.actor }}
           password: ${{ secrets.GITHUB_TOKEN }}
           registry: docker.pkg.github.com
@@ -68,11 +74,8 @@ jobs:
         with:
           creds: ${{ secrets.AZURE_CREDENTIALS }}
       - name: Deploy to Azure Webapps
-        env:
-          GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
         run: |
           muggle::az_webapp_config_muggle(
-            name = "hoad",
             plan = "hoad",
             resource_group = "hoad",
             subscription = "f0dd3a37-0a4e-4e7f-9c9b-cb9f60146edc"
@@ -82,10 +85,3 @@ jobs:
         uses: maxheld83/ghpages@github-token
         env:
           BUILD_DIR: docs
-          GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  sleep:
-    name: Sleep to let GITHUB_TOKEN persist
-    needs: CICD
-    runs-on: ubuntu-20.04
-    steps:
-      - run: sleep 2m
diff --git a/Dockerfile b/Dockerfile
index 85cf412..365cda6 100644
--- a/Dockerfile
+++ b/Dockerfile
@@ -1,4 +1,4 @@
-ARG MUGGLE_TAG=a7876ed9ad79909bcf8ff04d1d8c30503bdb8b0a
+ARG MUGGLE_TAG=latest
 FROM subugoe/muggle-buildtime-onbuild:${MUGGLE_TAG} as buildtime
 FROM subugoe/muggle-runtime-onbuild:${MUGGLE_TAG} as runtime
 CMD shinycaas::az_webapp_shiny_opts(); hoad::runHOAD()

From c1ab907e10bf4751a63bb3def70af4a2b9088603 Mon Sep 17 00:00:00 2001
From: Maximilian Held <info@maxheld.de>
Date: Fri, 21 Aug 2020 14:08:06 +0200
Subject: [PATCH 28/46] try with bare string

---
 .github/workflows/main.yaml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/.github/workflows/main.yaml b/.github/workflows/main.yaml
index 8cb094e..04cd9d4 100644
--- a/.github/workflows/main.yaml
+++ b/.github/workflows/main.yaml
@@ -8,7 +8,7 @@ jobs:
         shell: Rscript {0}
     env:
       # update muggle here
-      MUGGLE_TAG: "9ee02c2d9b32cab07681288de9995dc3d4124e4d"
+      MUGGLE_TAG: 9ee02c2d9b32cab07681288de9995dc3d4124e4d
       MUGGLE_PKG_NAME: ${{ github.event.repository.name }}
       GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
     container:

From 85cf576eeffe9e662e8026fb2d988c939b044e07 Mon Sep 17 00:00:00 2001
From: Maximilian Held <info@maxheld.de>
Date: Fri, 21 Aug 2020 14:10:39 +0200
Subject: [PATCH 29/46] set env one level higher

---
 .github/workflows/main.yaml | 13 +++++++------
 1 file changed, 7 insertions(+), 6 deletions(-)

diff --git a/.github/workflows/main.yaml b/.github/workflows/main.yaml
index 04cd9d4..c654ff8 100644
--- a/.github/workflows/main.yaml
+++ b/.github/workflows/main.yaml
@@ -1,18 +1,19 @@
 on: push
 
+env:
+  # update muggle here
+  MUGGLE_TAG: 9ee02c2d9b32cab07681288de9995dc3d4124e4d
+  MUGGLE_PKG_NAME: ${{ github.event.repository.name }}
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+
 jobs:
   CICD:
     runs-on: ubuntu-20.04
     defaults:
       run:
         shell: Rscript {0}
-    env:
-      # update muggle here
-      MUGGLE_TAG: 9ee02c2d9b32cab07681288de9995dc3d4124e4d
-      MUGGLE_PKG_NAME: ${{ github.event.repository.name }}
-      GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
     container:
-      image: subugoe/muggle-buildtime-onbuild:{{ env.MUGGLE_TAG }}
+      image: subugoe/muggle-buildtime-onbuild:${{ env.MUGGLE_TAG }}
     steps:
       - uses: actions/checkout@v2
       - name: Cache R Packages

From 4bdf513f0d27cf229506aeee633400c15be3a986 Mon Sep 17 00:00:00 2001
From: Maximilian Held <info@maxheld.de>
Date: Fri, 21 Aug 2020 14:32:59 +0200
Subject: [PATCH 30/46] set tag twice

---
 .github/workflows/main.yaml | 14 +++++++-------
 1 file changed, 7 insertions(+), 7 deletions(-)

diff --git a/.github/workflows/main.yaml b/.github/workflows/main.yaml
index c654ff8..7cd3582 100644
--- a/.github/workflows/main.yaml
+++ b/.github/workflows/main.yaml
@@ -1,11 +1,5 @@
 on: push
 
-env:
-  # update muggle here
-  MUGGLE_TAG: 9ee02c2d9b32cab07681288de9995dc3d4124e4d
-  MUGGLE_PKG_NAME: ${{ github.event.repository.name }}
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-
 jobs:
   CICD:
     runs-on: ubuntu-20.04
@@ -13,7 +7,13 @@ jobs:
       run:
         shell: Rscript {0}
     container:
-      image: subugoe/muggle-buildtime-onbuild:${{ env.MUGGLE_TAG }}
+      # update muggle here, and 2 lines below (!)
+      image: subugoe/muggle-buildtime-onbuild:9ee02c2d9b32cab07681288de9995dc3d4124e4d
+    env:
+      # update muggle here too (!)
+      MUGGLE_TAG: 9ee02c2d9b32cab07681288de9995dc3d4124e4d
+      MUGGLE_PKG_NAME: ${{ github.event.repository.name }}
+      GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
     steps:
       - uses: actions/checkout@v2
       - name: Cache R Packages

From 925e49bf382ebf31f20a27253a52a3bb869ddf31 Mon Sep 17 00:00:00 2001
From: Maximilian Held <info@maxheld.de>
Date: Fri, 21 Aug 2020 14:34:53 +0200
Subject: [PATCH 31/46] revert passing on MUGGLE_TAG

---
 .github/workflows/main.yaml | 6 +-----
 Dockerfile                  | 2 +-
 2 files changed, 2 insertions(+), 6 deletions(-)

diff --git a/.github/workflows/main.yaml b/.github/workflows/main.yaml
index 7cd3582..82ef012 100644
--- a/.github/workflows/main.yaml
+++ b/.github/workflows/main.yaml
@@ -7,11 +7,9 @@ jobs:
       run:
         shell: Rscript {0}
     container:
-      # update muggle here, and 2 lines below (!)
+      # update muggle here and in Dockerfile
       image: subugoe/muggle-buildtime-onbuild:9ee02c2d9b32cab07681288de9995dc3d4124e4d
     env:
-      # update muggle here too (!)
-      MUGGLE_TAG: 9ee02c2d9b32cab07681288de9995dc3d4124e4d
       MUGGLE_PKG_NAME: ${{ github.event.repository.name }}
       GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
     steps:
@@ -43,7 +41,6 @@ jobs:
         with:
           repository: ${{ github.repository }}/{{ env.MUGGLE_PKG_NAME }}-buildtime
           target: buildtime
-          build_args: MUGGLE_TAG=${{ env.MUGGLE_TAG }}
           username: ${{ github.actor }}
           password: ${{ secrets.GITHUB_TOKEN }}
           registry: docker.pkg.github.com
@@ -59,7 +56,6 @@ jobs:
         with:
           repository: ${{ github.repository }}/{{ env.MUGGLE_PKG_NAME }}-runtime
           target: runtime
-          build_args: MUGGLE_TAG=${{ env.MUGGLE_TAG }}
           username: ${{ github.actor }}
           password: ${{ secrets.GITHUB_TOKEN }}
           registry: docker.pkg.github.com
diff --git a/Dockerfile b/Dockerfile
index 365cda6..bbceab6 100644
--- a/Dockerfile
+++ b/Dockerfile
@@ -1,4 +1,4 @@
-ARG MUGGLE_TAG=latest
+ARG MUGGLE_TAG=9ee02c2d9b32cab07681288de9995dc3d4124e4d
 FROM subugoe/muggle-buildtime-onbuild:${MUGGLE_TAG} as buildtime
 FROM subugoe/muggle-runtime-onbuild:${MUGGLE_TAG} as runtime
 CMD shinycaas::az_webapp_shiny_opts(); hoad::runHOAD()

From 315bb201f8c1b333d972faf632d5ffbc02ce19c4 Mon Sep 17 00:00:00 2001
From: Maximilian Held <info@maxheld.de>
Date: Fri, 21 Aug 2020 14:43:16 +0200
Subject: [PATCH 32/46] fix lingering metar refs

---
 .github/workflows/main.yaml | 3 ++-
 R/plots.R                   | 2 +-
 inst/app/dashboard.Rmd      | 2 +-
 man/colors.Rd               | 4 ++--
 4 files changed, 6 insertions(+), 5 deletions(-)

diff --git a/.github/workflows/main.yaml b/.github/workflows/main.yaml
index 82ef012..2147eee 100644
--- a/.github/workflows/main.yaml
+++ b/.github/workflows/main.yaml
@@ -28,7 +28,8 @@ jobs:
           R_LIBS_SITE: $R_LIBS_RUNTIME_GH
         run: remotes::install_deps(dependencies = TRUE)
       - name: Check
-        run: devtools::check()
+        # TODO error out on all but note again https://github.com/subugoe/hoad/issues/194
+        run: devtools::check(error_on = "error")
       - name: Test Coverage
         run: covr::codecov()
       - name: Build Package Website
diff --git a/R/plots.R b/R/plots.R
index b8d9f84..cae5241 100644
--- a/R/plots.R
+++ b/R/plots.R
@@ -1,5 +1,5 @@
 #' Color palettes
-#' Colors used in the hybrid open access dashboard, based on [metar::ugoe_pal()]
+#' Colors used in the hybrid open access dashboard, based on [subugoetheme::ugoe_pal()]
 #' @family visualisation functions
 #' @name colors
 NULL
diff --git a/inst/app/dashboard.Rmd b/inst/app/dashboard.Rmd
index 70595e7..075d4d3 100644
--- a/inst/app/dashboard.Rmd
+++ b/inst/app/dashboard.Rmd
@@ -4,7 +4,7 @@ output:
   flexdashboard::flex_dashboard:
     orientation: rows
     vertical_layout: fill
-    css: !expr metar::subugoe_template()$assets$css
+    css: !expr subugoetheme::subugoe_template()$assets$css
 runtime: shiny
 ---
 
diff --git a/man/colors.Rd b/man/colors.Rd
index c84793a..809110c 100644
--- a/man/colors.Rd
+++ b/man/colors.Rd
@@ -7,7 +7,7 @@
 \alias{colors_license_unpaywall}
 \alias{colors_source_disclosure}
 \title{Color palettes
-Colors used in the hybrid open access dashboard, based on \code{\link[metar:ugoe_pal]{metar::ugoe_pal()}}}
+Colors used in the hybrid open access dashboard, based on \code{\link[subugoetheme:ugoe_pal]{subugoetheme::ugoe_pal()}}}
 \format{
 An object of class \code{character} of length 6.
 
@@ -24,7 +24,7 @@ colors_source_disclosure
 }
 \description{
 Color palettes
-Colors used in the hybrid open access dashboard, based on \code{\link[metar:ugoe_pal]{metar::ugoe_pal()}}
+Colors used in the hybrid open access dashboard, based on \code{\link[subugoetheme:ugoe_pal]{subugoetheme::ugoe_pal()}}
 }
 \section{Functions}{
 \itemize{

From 7085e870ea6a2921dc8dc95fa2906a62a18a3821 Mon Sep 17 00:00:00 2001
From: Maximilian Held <info@maxheld.de>
Date: Fri, 21 Aug 2020 14:49:47 +0200
Subject: [PATCH 33/46] fix bad yaml

---
 .github/workflows/main.yaml | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/.github/workflows/main.yaml b/.github/workflows/main.yaml
index 2147eee..11fd00a 100644
--- a/.github/workflows/main.yaml
+++ b/.github/workflows/main.yaml
@@ -40,7 +40,7 @@ jobs:
       - name: Build Buildtime Image
         uses: docker/build-push-action@v1
         with:
-          repository: ${{ github.repository }}/{{ env.MUGGLE_PKG_NAME }}-buildtime
+          repository: ${{ github.repository }}/${{ env.MUGGLE_PKG_NAME }}-buildtime
           target: buildtime
           username: ${{ github.actor }}
           password: ${{ secrets.GITHUB_TOKEN }}
@@ -55,7 +55,7 @@ jobs:
       - name: Build Runtime Image
         uses: docker/build-push-action@v1
         with:
-          repository: ${{ github.repository }}/{{ env.MUGGLE_PKG_NAME }}-runtime
+          repository: ${{ github.repository }}/${{ env.MUGGLE_PKG_NAME }}-runtime
           target: runtime
           username: ${{ github.actor }}
           password: ${{ secrets.GITHUB_TOKEN }}

From 4cac09326a681960581b661c2453dee84a3dd4cd Mon Sep 17 00:00:00 2001
From: Maximilian Held <info@maxheld.de>
Date: Fri, 21 Aug 2020 16:14:20 +0200
Subject: [PATCH 34/46] try with restart

---
 .github/workflows/main.yaml | 3 ++-
 1 file changed, 2 insertions(+), 1 deletion(-)

diff --git a/.github/workflows/main.yaml b/.github/workflows/main.yaml
index 11fd00a..42805f6 100644
--- a/.github/workflows/main.yaml
+++ b/.github/workflows/main.yaml
@@ -76,7 +76,8 @@ jobs:
           muggle::az_webapp_config_muggle(
             plan = "hoad",
             resource_group = "hoad",
-            subscription = "f0dd3a37-0a4e-4e7f-9c9b-cb9f60146edc"
+            subscription = "f0dd3a37-0a4e-4e7f-9c9b-cb9f60146edc",
+            restart = TRUE
           )
       - name: Deploy to GitHub Pages
         if: github.ref == 'refs/heads/master'

From 0ffbcc4177b19edcc9c229c129c421f26981a069 Mon Sep 17 00:00:00 2001
From: Maximilian Held <info@maxheld.de>
Date: Fri, 21 Aug 2020 16:45:16 +0200
Subject: [PATCH 35/46] add sleep

---
 .github/workflows/main.yaml | 6 ++++++
 1 file changed, 6 insertions(+)

diff --git a/.github/workflows/main.yaml b/.github/workflows/main.yaml
index 42805f6..8aa64c8 100644
--- a/.github/workflows/main.yaml
+++ b/.github/workflows/main.yaml
@@ -84,3 +84,9 @@ jobs:
         uses: maxheld83/ghpages@github-token
         env:
           BUILD_DIR: docs
+  sleep:
+    name: Sleep to let GITHUB_TOKEN persist
+    needs: CICD
+    runs-on: ubuntu-20.04
+    steps:
+      - run: sleep 3m

From c7c69940357ac69d9bae79669adf2e8c4652bab6 Mon Sep 17 00:00:00 2001
From: Maximilian Held <info@maxheld.de>
Date: Mon, 24 Aug 2020 16:55:44 +0200
Subject: [PATCH 36/46] add shinycaas

---
 DESCRIPTION | 6 ++++--
 1 file changed, 4 insertions(+), 2 deletions(-)

diff --git a/DESCRIPTION b/DESCRIPTION
index b41f685..b957dbe 100644
--- a/DESCRIPTION
+++ b/DESCRIPTION
@@ -74,7 +74,8 @@ Suggests:
     purrr,
     covr,
     testthat,
-    subugoetheme
+    subugoetheme,
+    shinycaas
 URL: https://subugoe.github.io/hoad, https://github.com/subugoe/hoad/
 BugReports: https://github.com/subugoe/hoad/issues
 RoxygenNote: 7.1.1
@@ -87,4 +88,5 @@ Imports:
     ggplot2,
     rlang
 Remotes:
-    subugoe/subugoetheme@1.0.0
+    subugoe/subugoetheme@1.0.0,
+    subugoe/shinycaas

From 7d8e7f275851869816f1f9e82d96e3d47017c054 Mon Sep 17 00:00:00 2001
From: Maximilian Held <info@maxheld.de>
Date: Mon, 24 Aug 2020 18:23:05 +0200
Subject: [PATCH 37/46] fix bad template call

---
 inst/app/dashboard.Rmd | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/inst/app/dashboard.Rmd b/inst/app/dashboard.Rmd
index 075d4d3..f9be5e0 100644
--- a/inst/app/dashboard.Rmd
+++ b/inst/app/dashboard.Rmd
@@ -4,7 +4,7 @@ output:
   flexdashboard::flex_dashboard:
     orientation: rows
     vertical_layout: fill
-    css: !expr subugoetheme::subugoe_template()$assets$css
+    css: !expr subugoetheme::pkgdown_template()$assets$css
 runtime: shiny
 ---
 

From 157987a356df99e9b556d968ee169f374d517a27 Mon Sep 17 00:00:00 2001
From: Maximilian Held <info@maxheld.de>
Date: Mon, 24 Aug 2020 18:47:41 +0200
Subject: [PATCH 38/46] add sleep in same job

---
 .github/workflows/main.yaml | 2 ++
 1 file changed, 2 insertions(+)

diff --git a/.github/workflows/main.yaml b/.github/workflows/main.yaml
index 8aa64c8..33b0118 100644
--- a/.github/workflows/main.yaml
+++ b/.github/workflows/main.yaml
@@ -84,6 +84,8 @@ jobs:
         uses: maxheld83/ghpages@github-token
         env:
           BUILD_DIR: docs
+      - name: Sleep to let GITHUB_TOKEN persist
+        run: Sys.sleep(1200)
   sleep:
     name: Sleep to let GITHUB_TOKEN persist
     needs: CICD

From 228ec1b0501f3076e16309955d2894354794b836 Mon Sep 17 00:00:00 2001
From: Maximilian Held <info@maxheld.de>
Date: Mon, 24 Aug 2020 19:30:07 +0200
Subject: [PATCH 39/46] reduce sleep and hardcode deps

---
 .github/workflows/main.yaml | 14 +++++++-------
 DESCRIPTION                 |  2 +-
 2 files changed, 8 insertions(+), 8 deletions(-)

diff --git a/.github/workflows/main.yaml b/.github/workflows/main.yaml
index 33b0118..4534b3b 100644
--- a/.github/workflows/main.yaml
+++ b/.github/workflows/main.yaml
@@ -85,10 +85,10 @@ jobs:
         env:
           BUILD_DIR: docs
       - name: Sleep to let GITHUB_TOKEN persist
-        run: Sys.sleep(1200)
-  sleep:
-    name: Sleep to let GITHUB_TOKEN persist
-    needs: CICD
-    runs-on: ubuntu-20.04
-    steps:
-      - run: sleep 3m
+        run: Sys.sleep(600)
+  # sleep:
+  #   name: Sleep to let GITHUB_TOKEN persist
+  #   needs: CICD
+  #   runs-on: ubuntu-20.04
+  #   steps:
+  #     - run: sleep 3m
diff --git a/DESCRIPTION b/DESCRIPTION
index b957dbe..178fa86 100644
--- a/DESCRIPTION
+++ b/DESCRIPTION
@@ -89,4 +89,4 @@ Imports:
     rlang
 Remotes:
     subugoe/subugoetheme@1.0.0,
-    subugoe/shinycaas
+    subugoe/shinycaas@31684600b286d5da5639a430a4b83a04de36bd34

From 4f2e957b23ebb1ccc48165f0355e8c05e11bbc30 Mon Sep 17 00:00:00 2001
From: Maximilian Held <info@maxheld.de>
Date: Mon, 24 Aug 2020 20:00:03 +0200
Subject: [PATCH 40/46] try sleeping in separate process

---
 .github/workflows/main.yaml | 16 ++++++++--------
 1 file changed, 8 insertions(+), 8 deletions(-)

diff --git a/.github/workflows/main.yaml b/.github/workflows/main.yaml
index 4534b3b..5971b54 100644
--- a/.github/workflows/main.yaml
+++ b/.github/workflows/main.yaml
@@ -84,11 +84,11 @@ jobs:
         uses: maxheld83/ghpages@github-token
         env:
           BUILD_DIR: docs
-      - name: Sleep to let GITHUB_TOKEN persist
-        run: Sys.sleep(600)
-  # sleep:
-  #   name: Sleep to let GITHUB_TOKEN persist
-  #   needs: CICD
-  #   runs-on: ubuntu-20.04
-  #   steps:
-  #     - run: sleep 3m
+      # - name: Sleep to let GITHUB_TOKEN persist
+      #   run: Sys.sleep(600)
+  sleep:
+    name: Sleep to let GITHUB_TOKEN persist
+    needs: CICD
+    runs-on: ubuntu-20.04
+    steps:
+      - run: sleep 10m

From 56376b058630cb5fcf889a864d0e350c579860fa Mon Sep 17 00:00:00 2001
From: Maximilian Held <info@maxheld.de>
Date: Mon, 24 Aug 2020 21:22:56 +0200
Subject: [PATCH 41/46] reduce sleep

---
 .github/workflows/main.yaml | 10 ++--------
 1 file changed, 2 insertions(+), 8 deletions(-)

diff --git a/.github/workflows/main.yaml b/.github/workflows/main.yaml
index 5971b54..56a208a 100644
--- a/.github/workflows/main.yaml
+++ b/.github/workflows/main.yaml
@@ -84,11 +84,5 @@ jobs:
         uses: maxheld83/ghpages@github-token
         env:
           BUILD_DIR: docs
-      # - name: Sleep to let GITHUB_TOKEN persist
-      #   run: Sys.sleep(600)
-  sleep:
-    name: Sleep to let GITHUB_TOKEN persist
-    needs: CICD
-    runs-on: ubuntu-20.04
-    steps:
-      - run: sleep 10m
+      - name: Sleep to let GITHUB_TOKEN persist
+        run: Sys.sleep(1)

From 4e4a11e91b8eca663857d3473b394fde22ad05f5 Mon Sep 17 00:00:00 2001
From: Maximilian Held <info@maxheld.de>
Date: Mon, 24 Aug 2020 21:39:30 +0200
Subject: [PATCH 42/46] increase sleep

---
 .github/workflows/main.yaml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/.github/workflows/main.yaml b/.github/workflows/main.yaml
index 56a208a..7e43506 100644
--- a/.github/workflows/main.yaml
+++ b/.github/workflows/main.yaml
@@ -85,4 +85,4 @@ jobs:
         env:
           BUILD_DIR: docs
       - name: Sleep to let GITHUB_TOKEN persist
-        run: Sys.sleep(1)
+        run: Sys.sleep(60)

From 7cadb91a861ff2829877946d637592e81faa0077 Mon Sep 17 00:00:00 2001
From: Maximilian Held <info@maxheld.de>
Date: Mon, 24 Aug 2020 21:52:08 +0200
Subject: [PATCH 43/46] increase sleep

---
 .github/workflows/main.yaml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/.github/workflows/main.yaml b/.github/workflows/main.yaml
index 7e43506..07d4608 100644
--- a/.github/workflows/main.yaml
+++ b/.github/workflows/main.yaml
@@ -85,4 +85,4 @@ jobs:
         env:
           BUILD_DIR: docs
       - name: Sleep to let GITHUB_TOKEN persist
-        run: Sys.sleep(60)
+        run: Sys.sleep(120)

From 74c872509c7ea53d15e3a93c629d8635c5209b79 Mon Sep 17 00:00:00 2001
From: Maximilian Held <info@maxheld.de>
Date: Mon, 24 Aug 2020 22:04:43 +0200
Subject: [PATCH 44/46] increase sleep

---
 .github/workflows/main.yaml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/.github/workflows/main.yaml b/.github/workflows/main.yaml
index 07d4608..cf5178e 100644
--- a/.github/workflows/main.yaml
+++ b/.github/workflows/main.yaml
@@ -85,4 +85,4 @@ jobs:
         env:
           BUILD_DIR: docs
       - name: Sleep to let GITHUB_TOKEN persist
-        run: Sys.sleep(120)
+        run: Sys.sleep(240)

From a92d94a647df1374c5f8caa5d1ed98f07263b993 Mon Sep 17 00:00:00 2001
From: Maximilian Held <info@maxheld.de>
Date: Wed, 18 Nov 2020 16:55:15 +0100
Subject: [PATCH 45/46] remove obsolete workspace

---
 hoad.code-workspace | 8 --------
 1 file changed, 8 deletions(-)
 delete mode 100644 hoad.code-workspace

diff --git a/hoad.code-workspace b/hoad.code-workspace
deleted file mode 100644
index 5709732..0000000
--- a/hoad.code-workspace
+++ /dev/null
@@ -1,8 +0,0 @@
-{
-	"folders": [
-		{
-			"path": "."
-		}
-	],
-	"settings": {}
-}

From f6f3c1c548cee8a27520cf15162dce987659090c Mon Sep 17 00:00:00 2001
From: Maximilian Held <info@maxheld.de>
Date: Thu, 3 Dec 2020 19:28:17 +0100
Subject: [PATCH 46/46] add newsletter email

---
 .github/newsletter.md | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/.github/newsletter.md b/.github/newsletter.md
index ee3cbcf..2f5235e 100644
--- a/.github/newsletter.md
+++ b/.github/newsletter.md
@@ -1,6 +1,6 @@
 # Newsletter abonnieren
 
-In unserem deutschsprachigen Newsletter informieren wir Sie über neue Entwicklungen und Veranstaltungen rund um das Projekt.
+In unserem deutschsprachigen Newsletter `hoad@sub.uni-goettingen.de` informieren wir Sie über neue Entwicklungen und Veranstaltungen rund um das Projekt.
 
 <form method="post" action="https://listserv.gwdg.de/mailman/subscribe/hoad">
   <div class="form-group">