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targets_mirnaseq.txt
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targets_mirnaseq.txt
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# Project ID: Arabidopsis - Differential expression of microRNAs in wildtype versus DCL1 mutants in Arabidopsis thaliana (SRA: SRP094441; PRJNA355875; GEO: GSE90771)
# The following line(s) allow to specify the contrasts needed for comparative analyses, such as DEG identification. All possible comparisons can be specified with 'CMPset: ALL'.
# <CMP> CMPset1: DCL1_knockdown-wildtype
# <CMP> CMPset2: ALL
FileName SampleName Factor SampleLong Organism LibraryLayout Date
./data/SRR5068868_1.fastq.gz wildtype_A wildtype wildtype_A_GSM2412286 Arabidopsis thaliana SINGLE 2017-04-18T00:00:00Z
./data/SRR5068869_1.fastq.gz wildtype_B wildtype wildtype_B_GSM2412287 Arabidopsis thaliana SINGLE 2017-04-18T00:00:00Z
./data/SRR5068870_1.fastq.gz wildtype_C wildtype wildtype_C_GSM2412288 Arabidopsis thaliana SINGLE 2017-04-18T00:00:00Z
./data/SRR5068871_1.fastq.gz DCL1_knockdown_A DCL1_knockdown DCL1_knockdown_A_GSM2412289 Arabidopsis thaliana SINGLE 2017-04-18T00:00:00Z
./data/SRR5068872_1.fastq.gz DCL1_knockdown_B DCL1_knockdown DCL1_knockdown_B_GSM2412290 Arabidopsis thaliana SINGLE 2017-04-18T00:00:00Z
./data/SRR5068873_1.fastq.gz DCL1_knockdown_C DCL1_knockdown DCL1_knockdown_C_GSM2412291 Arabidopsis thaliana SINGLE 2017-04-18T00:00:00Z