-
Notifications
You must be signed in to change notification settings - Fork 0
/
kiops.py
316 lines (239 loc) · 8.83 KB
/
kiops.py
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
import math
#from mpi4py import MPI
import numpy
import scipy.linalg
def kiops(τ_out, A, u, tol = 1e-10, m_init = 10, mmin = 10, mmax = 128, iop = 2, task1 = False):
"""
kiops(tstops, A, u; kwargs...) -> (w, stats)
Evaluate a linear combinaton of the ``φ`` functions evaluated at ``tA`` acting on
vectors from ``u``, that is
```math
w(i) = φ_0(t[i] A) u[0, :] + φ_1(t[i] A) u[1, :] + φ_2(t[i] A) u[2, :] + ...
```
The size of the Krylov subspace is changed dynamically during the integration.
The Krylov subspace is computed using the incomplete orthogonalization method.
Arguments:
- `τ_out` - Array of `τ_out`
- `A` - the matrix argument of the ``φ`` functions
- `u` - the matrix with rows representing the vectors to be multiplied by the ``φ`` functions
Optional arguments:
- `tol` - the convergence tolerance required (default: 1e-7)
- `mmin`, `mmax` - let the Krylov size vary between mmin and mmax (default: 10, 128)
- `m` - an estimate of the appropriate Krylov size (default: mmin)
- `iop` - length of incomplete orthogonalization procedure (default: 2)
- `task1` - if true, divide the result by 1/T**p
Returns:
- `w` - the linear combination of the ``φ`` functions evaluated at ``tA`` acting on the vectors from ``u``
- `stats[0]` - number of substeps
- `stats[1]` - number of rejected steps
- `stats[2]` - number of Krylov steps
- `stats[3]` - number of matrix exponentials
- `stats[4]` - Error estimate
- `stats[5]` - the Krylov size of the last substep
`n` is the size of the original problem
`p` is the highest index of the ``φ`` functions
References:
* Gaudreault, S., Rainwater, G. and Tokman, M., 2018. KIOPS: A fast adaptive Krylov subspace solver for exponential integrators. Journal of Computational Physics. Based on the PHIPM and EXPMVP codes (http://www1.maths.leeds.ac.uk/~jitse/software.html). https://gitlab.com/stephane.gaudreault/kiops.
* Niesen, J. and Wright, W.M., 2011. A Krylov subspace method for option pricing. SSRN 1799124
* Niesen, J. and Wright, W.M., 2012. Algorithm 919: A Krylov subspace algorithm for evaluating the ``φ``-functions appearing in exponential integrators. ACM Transactions on Mathematical Software (TOMS), 38(3), p.22
"""
ppo, n = u.shape
p = ppo - 1
if p == 0:
p = 1
# Add extra column of zeros
u = numpy.row_stack((u, numpy.zeros(u.size)))
# We only allow m to vary between mmin and mmax
m = max(mmin, min(m_init, mmax))
# Preallocate matrix
V = numpy.zeros((mmax + 1, n + p), u.dtype)
H = numpy.zeros((mmax + 1, mmax + 1), u.dtype)
step = 0
krystep = 0
ireject = 0
reject = 0
exps = 0
sgn = numpy.sign(τ_out[-1])
τ_now = 0.0
τ_end = abs(τ_out[-1])
happy = False
j = 0
conv = 0.0
numSteps = len(τ_out)
# Initial condition
w = numpy.zeros((numSteps, n), u.dtype)
w[0, :] = u[0, :].copy()
# compute the 1-norm of u
local_nrmU = numpy.sum(abs(u[1:, :]), axis=1)
global_normU = numpy.empty_like(local_nrmU)
global_normU = local_nrmU
normU = numpy.amax(global_normU)
# Normalization factors
if ppo > 1 and normU > 0:
ex = math.ceil(math.log2(normU))
nu = 2**(-ex)
mu = 2**(ex)
else:
nu = 1.0
mu = 1.0
# Flip the rest of the u matrix
u_flip = nu * numpy.flipud(u[1:, :])
# Compute and initial starting approximation for the step size
τ = τ_end
# Setting the safety factors and tolerance requirements
if τ_end > 1:
γ = 0.2
γ_mmax = 0.1
else:
γ = 0.9
γ_mmax = 0.6
delta = 1.4
# Used in the adaptive selection
oldm = -1; oldτ = math.nan; ω = math.nan
orderold = True; kestold = True
l = 0
while τ_now < τ_end:
# Compute necessary starting information
if j == 0:
H[:,:] = 0.0
V[0, 0:n] = w[l, :]
# Update the last part of w
for k in range(p-1):
i = p - k + 1
V[j, n+k] = (τ_now**i) / math.factorial(i) * mu
V[j, n+p-1] = mu
# Normalize initial vector (this norm is nonzero)
local_sum = V[0, 0:n] @ V[0, 0:n]
global_sum_nrm = numpy.empty_like(local_sum)
global_sum_nrm = local_sum
β = numpy.sqrt( global_sum_nrm + V[j, n:n+p] @ V[j, n:n+p] )
# The first Krylov basis vector
V[j, :] /= β
# Incomplete orthogonalization process
while j < m:
j = j + 1
# Augmented matrix - vector product
V[j, 0:n ] = A( V[j-1, 0:n] ) + V[j-1, n:n+p] @ u_flip
V[j, n:n+p-1] = V[j-1, n+1:n+p]
V[j, -1 ] = 0.0
# Classical Gram-Schmidt
ilow = max(0, j - iop)
local_sum = V[ilow:j, 0:n] @ V[j, 0:n]
global_sum = numpy.empty_like(local_sum)
global_sum = local_sum
H[ilow:j, j-1] = global_sum + V[ilow:j, n:n+p] @ V[j, n:n+p]
V[j, :] = V[j, :] - V[ilow:j,:].T @ H[ilow:j, j-1]
local_sum = V[j, 0:n] @ V[j, 0:n]
global_sum_nrm = local_sum
nrm = numpy.sqrt( global_sum_nrm + V[j, n:n+p] @ V[j, n:n+p] )
# Happy breakdown
if nrm < tol:
happy = True
break
H[j, j-1] = nrm
V[j, :] = (1.0 / nrm) * V[j, :]
krystep += 1
# To obtain the phi_1 function which is needed for error estimate
H[0, j] = 1.0
# Save h_j+1,j and remove it temporarily to compute the exponential of H
nrm = H[j, j-1]
H[j, j-1] = 0.0
# Compute the exponential of the augmented matrix
F = scipy.linalg.expm(sgn * τ * H[0:j + 1, 0:j + 1])
exps += 1
# Restore the value of H_{m+1,m}
H[j, j-1] = nrm
if happy is True:
# Happy breakdown wrap up
ω = 0.
err = 0.
τ_new = min(τ_end - (τ_now + τ), τ)
m_new = m
happy = False
else:
# Local truncation error estimation
err = abs(β * nrm * F[j-1, j])
# Error for this step
oldω = ω
ω = τ_end * err / (τ * tol)
# Estimate order
if m == oldm and τ != oldτ and ireject >= 1:
order = max(1, math.log(ω/oldω) / math.log(τ/oldτ))
orderold = False
elif orderold is True or ireject == 0:
orderold = True
order = j/4
else:
orderold = True
# Estimate k
if m != oldm and τ == oldτ and ireject >= 1:
kest = max(1.1, (ω/oldω)**(1/(oldm-m)))
kestold = False
elif kestold is True or ireject == 0:
kestold = True
kest = 2
else:
kestold = True
if ω > delta:
remaining_time = τ_end - τ_now
else:
remaining_time = τ_end - (τ_now + τ)
# Krylov adaptivity
same_τ = min(remaining_time, τ)
τ_opt = τ * (γ / ω)**(1 / order)
τ_opt = min(remaining_time, max(τ/5, min(5*τ, τ_opt)))
m_opt = math.ceil(j + math.log(ω / γ) / math.log(kest))
m_opt = max(mmin, min(mmax, max(math.floor(3/4*m), min(m_opt, math.ceil(4/3*m)))))
if j == mmax:
if ω > delta:
m_new = j
τ_new = τ * (γ_mmax / ω)**(1 / order)
τ_new = min(τ_end - τ_now, max(τ/5, τ_new))
else:
τ_new = τ_opt
m_new = m
else:
m_new = m_opt
τ_new = same_τ
# Check error against target
if ω <= delta:
# Yep, got the required tolerance; update
reject += ireject
step += 1
# Udate for τ_out in the interval (τ_now, τ_now + τ)
blownTs = 0
nextT = τ_now + τ
for k in range(l, numSteps):
if abs(τ_out[k]) < abs(nextT):
blownTs += 1
if blownTs != 0:
# Copy current w to w we continue with.
w[l+blownTs, :] = w[l, :].copy()
for k in range(blownTs):
τPhantom = τ_out[l+k] - τ_now
F2 = scipy.linalg.expm(sgn * τPhantom * H[0:j, :j])
w[l+k, :] = β * F2[:j, 0] @ V[:j, :n]
# Advance l.
l += blownTs
# Using the standard scheme
w[l, :] = β * F[:j, 0] @ V[:j, :n]
# Update τ_out
τ_now += τ
j = 0
ireject = 0
conv += err
else:
# Nope, try again
ireject += 1
# Restore the original matrix
H[0, j] = 0.0
oldτ = τ
τ = τ_new
oldm = m
m = m_new
if task1 is True:
for k in range(numSteps):
w[k, :] = w[k, :] / τ_out[k]
m_ret=m
stats = (step, reject, krystep, exps, conv, m_ret)
return w, stats