New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Error reading loom file converted from Seurat object for Velocity #206

Open

peictang opened this issue Jan 9, 2024 · 0 comments

peictang commented Jan 9, 2024 •

edited

Loading

Hello,
I cannot read my loom file that was converted from a Seurat object. I ran following command in R:
ldat <- read.loom.matrices(file = "XXX")

but Error message showed :
reading loom file via hdf5r...
Error in h(simpleError(msg, call)) :
error in evaluating the argument 'x' in selecting a method for function 't': An object with name layers/spliced does not exist in this group

I can't figure out why after days. I am wondering is there any suggestions?
Thank you.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment