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NOTICE.txt
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Tellurium v2.1.0
Copyright 2017 Kiri Choi, J Kyle Medley, Matthias König, Kaylene Stocking, Caroline Cannistra, Michal Galdzicki, and Herbert Sauro
http://tellurium.analogmachine.org/
This product makes use of the following open source software packages:
bioservices 1.4.16
Copyright (c) 2017 Thomas Cokelaer
Licensed under GPL License
https://github.com/cokelaer/bioservices
cobraPy 0.8.2
Copyright (c) Daniel Robert Hyduke and Ali Ebrahim
Licensed under LGPL/GPL v2
https://opencobra.github.io/cobrapy/
control 0.7.0
Copyright Richard M. Murray et al.
Licensed under BSD license
https://sourceforge.net/projects/python-control/
IPython 5.5.0
Copyright (c) 2017, IPython Development Team
IPython is licensed under the terms of the new or revised BSD license
http://ipython.org/
jedi 0.11.0
Copyright 2012 - 2017, Jedi contributors
Licensed under MIT license.
http://jedi.jedidjah.ch/en/latest/#
jinja2 2.9.6
Copyright (c) 2017 by the Jinja Team
Licensed under BSD license.
http://jinja.pocoo.org/docs/dev/
jsonschema 2.6.0
Copyright (c) 2017 Julian Berman
Licensed under MIT license.
https://github.com/Julian/jsonschema
Jupyter 1.0.0
Copyright © 2017 Project Jupyter
Licensed under BSD license.
https://jupyter.org/
libAntimony 2.9.4
Copyright (c) 2008-2015, Lucian Smith and Herbert Sauro
Distributed under BSD license
http://antimony.sourceforge.net/
libCombine 0.2.2
Copyright (c) 2016, Sarah M. Keating & Frank T. Bergmann All rights reserved.
Available under the Simplified BSD license.
https://github.com/sbmlteam/libCombine
libNUML 1.1.1
Copyright 2013 The University of Manchester, UK
Available under the LGPL 2.1 license. https://github.com/NuML/NuML/blob/master/libnuml/LICENSE.txt
https://github.com/NuML/NuML
libRoadRunner 1.4.24
Copyright (C) 2012-2017 Andy Somogyi, Herbert Sauro
Distributed under Apache License, Version 2.0
http://libroadrunner.org/
libSBML 5.15.0
Copyright © 2013-2014 jointly by the following organizations:
1. California Institute of Technology, Pasadena, CA, USA
2. EMBL European Bioinformatics Institute (EBML-EBI), Hinxton, UK
3. University of Heidelberg, Heidelberg, Germany
Copyright © 2009-2013 jointly by the following organizations:
1. California Institute of Technology, Pasadena, CA, USA
2. EMBL European Bioinformatics Institute (EMBL-EBI), Hinxton, UK
Copyright © 2006-2008 by the California Institute of Technology, Pasadena, CA, USA
Copyright © 2002-2005 jointly by the following organizations:
1. California Institute of Technology, Pasadena, CA, USA
2. Japan Science and Technology Agency, Japan
Distributed under GNU LGPL 2.1 license
http://sbml.org/Software/libSBML
libSEDML 0.4.2
Copyright (c) 2013-2015, Frank T. Bergmann, All rights reserved.
Distributed under Simplified BSD License.
https://github.com/fbergmann/libSEDML
LMFIT 0.9.7
Copyright (c) 2014 Matthew Newville, The University of Chicago
Till Stensitzki, Freie Universitat Berlin
Daniel B. Allen, Johns Hopkins University
Michal Rawlik, Eidgenossische Technische Hochschule, Zurich
Antonino Ingargiola, University of California, Los Angeles
A. R. J. Nelson, Australian Nuclear Science and Technology Organisation
Distributed under BSD License.
https://lmfit.github.io/lmfit-py/index.html
matplotlib 2.1.0
Copyright (c) 2012-2015 Matplotlib Development Team; All Rights Reserved
Distributed under matplotlib license, based on the PSF license
http://matplotlib.org/
matplotlib2tikz 0.6.2
Copyright (c) 2010-2016 Nico Schlömer
matplotlib2tikz is published under the MIT license
https://github.com/nschloe/matplotlib2tikz
nose 1.3.7
Copyright 2005-2009, Jason Pellerin
Distributed under GNU LGPL license.
https://nose.readthedocs.org/en/latest/
numpy 1.13.3
Copyright (c) 2005-2015, NumPy Developers.
Distributed under BSD license, http://www.numpy.org/license.html#license
http://www.numpy.org
pandas 0.20.3
Copyright (c) 2011-2012, Lambda Foundry, Inc. and PyData Development Team. All rights reserved.
Copyright (c) 2008-2011 AQR Capital Management, LLC. All rights reserved.
pandas is distributed under a 3-clause ("Simplified" or "New") BSD license.
phrasedml 1.0.8
Copyright (c) 2017, Lucian Smith, Kiri Choi, and Herbert Sauro
Distributed under BSD 3 license, https://github.com/sys-bio/phrasedml/blob/master/LICENSE.txt
https://github.com/sys-bio/phrasedml
pip 9.0.1
Copyright (c) 2008-2016 The pip developers
Licensed under MIT license.
https://pip.pypa.io/en/stable/
plotly 2.1.0
Copyright 2017 Plotly, Inc.
Code released under the MIT license.
https://plot.ly/
pysces 0.9.5
Copyright (c) 2004 - 2017, Brett G. Olivier, Johann M. Rohwer and Jan-Hendrik S. Hofmeyr All rights reserved.
PySCeS is distributed under a BSD style licence, please see LICENCE.txt for details. https://github.com/PySCeS/pysces/blob/master/LICENSE.txt
http://pysces.sourceforge.net/
pygraphviz 1.3.1
Copyright (C) 2006-2015 by Aric Hagberg, Dan Schult, Manos Renieris.
Distributed with BSD license.
https://pygraphviz.github.io/
pyparsing 2.2.0
Paul McGuire
Distributed under the MIT license (no copyright statement)
http://pyparsing.wikispaces.com/
PyQt5
Copyright (C) 2015 Riverbank Computing Limited <[email protected]>
Lincensed under the terms of the GNU GPL 3, with Riverbank GPL Exception version 1.1
see GPL_EXCEPTION.TXT in the PyQt5 Source Code. The right to use Open Source Licenses not compatible with the GNU General Public License: Apache License 2.0
http://www.riverbankcomputing.com/
pySBOL 2.2.0
Distributed under Apache 2.0 license.
https://github.com/SynBioDex/pysbol
Python 2.7.13
Copyright (c) 2001-2017 Python Software Foundation; All Rights Reserved
Distributed under PSF LICENSE FOR PYTHON 2.7.6, http://docs.python.org/2/license.html
http://python.org/
python-dateutil 2.6.1
Copyright (c) 2003-2011 - Gustavo Niemeyer <[email protected]>
Copyright (c) 2012 - Tomi PievilÎáÎéÎåinen <[email protected]>
Distributed under Simplified BSD license
http://labix.org/python-dateutil
rrPlugins 1.1.8
Copyright (C) 2012-2015 Totte Karlsson, Herbert Sauro
Distributed under Apache License, Version 2.0
http://tellurium.analogmachine.org/plugins/
sbml2matlab 1.2.2
Copyright (c) 2012, Stanley Gu
Distributed under BSD License
https://github.com/sys-bio/sbml2matlab
Scipy 0.19.1
Copyright © 2001, 2002 Enthought, Inc. All rights reserved.
Copyright © 2003-2015 SciPy Developers. All rights reserved.
Distributed under BSD license, https://www.scipy.org/scipylib/license.html
https://www.scipy.org/
Seaborn 0.7.1
Copyright (c) 2012-2013, Michael L. Waskom
Released under a BSD (3-clause) license
https://stanford.edu/~mwaskom/software/seaborn/
six 1.10.0
Copyright (c) 2010-2015 Benjamin Peterson
Distributed under the MIT license
http://pypi.python.org/pypi/six/
Spyder 3.2.3 (modified)
Copyright (c) 2009- The Spyder Development Team
Licensed under the terms of the MIT License
https://www.spyder-ide.org/
SymPy 1.1.1
Copyright (c) 2006-2016 SymPy Development Team
Licensed under New BSD License.
http://www.sympy.org/en/index.html
urllib3 1.22
Copyright 2008-2016 Andrey Petrov and contributors
urllib3 is made available under the MIT License.
https://urllib3.readthedocs.io/en/latest/
Winpython 2.7.13.0
Copyright (c) 2009-2013, Pierre Raybaut
Copyright (c) 2014-2016 The Winpython development team
Licensed under the terms of the MIT License
https://winpython.github.io/