DESCRIPTION

Package: microbiome.onglab
Type: Package
Title: Wrapper functions to run dada2 with htCondor
Version: 0.2.2
Author: Rene Welch
Maintainer: Rene Welch <rwelch2@wisc.edu>
Authors@R: c(person(given = "Rene", family = "Welch", role = c("aut",
        "cre"), email = "[rwelch2@wisc.edu]"))
Description: We wanted to focus on efficiency, and be able to run dada2 a little bit faster. 
    Therefore, we wrapped dada2's functions, and using a split-apply-combine strategy with 
    htCondor we made an accelerated implementatin.
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: true
Depends:
    magrittr,
    optparse
Suggests: 
    knitr,
    rmarkdown,
    BiocStyle
VignetteBuilder: knitr
RoxygenNote: 7.0.2
Imports: 
    dplyr,
    stringr,
    readr,
    jsonlite,
    furrr,
    dada2,
    DECIPHER,
    future,
    tidyr,
    scales,
    ggplot2,
    forcats,
    abind,
    RCurl,
    tibble,
    shiny,
    tidyselect,
    cowplot,
    purrr