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NAMESPACE
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NAMESPACE
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# Generated by roxygen2: do not edit by hand
export(circosPlot)
export(compareMarker)
export(comparePath)
export(createCommPath)
export(diffAllPath)
export(diffPath)
export(dotPlot.LR)
export(dotPlot.pathway)
export(filterLR)
export(filterLR.path.contain.lig)
export(filterLR.path.contain.rep)
export(filterPath)
export(findLRmarker)
export(findLRpairs)
export(findLRpath)
export(findLigand)
export(findReceptor)
export(pathChainPlot)
export(pathChainPlot.compare)
export(pathHeatmap)
export(pathNet)
export(pathNet.lig.path.stat)
export(pathNet.rep.path.stat)
export(pathNetPlot)
export(pathNetPlot.downstream)
export(pathNetPlot.upstream)
export(pathPlot)
export(pathPlot.compare)
export(pathTest)
export(scorePath)
exportClasses(CommPath)
importFrom(circlize,chordDiagram)
importFrom(circlize,circos.clear)
importFrom(circlize,circos.par)
importFrom(circlize,circos.text)
importFrom(circlize,circos.track)
importFrom(ggplot2,aes)
importFrom(ggplot2,annotate)
importFrom(ggplot2,element_blank)
importFrom(ggplot2,element_line)
importFrom(ggplot2,element_rect)
importFrom(ggplot2,element_text)
importFrom(ggplot2,facet_grid)
importFrom(ggplot2,geom_point)
importFrom(ggplot2,geom_rect)
importFrom(ggplot2,geom_segment)
importFrom(ggplot2,geom_text)
importFrom(ggplot2,geom_tile)
importFrom(ggplot2,ggplot)
importFrom(ggplot2,labs)
importFrom(ggplot2,scale_color_gradientn)
importFrom(ggplot2,scale_color_manual)
importFrom(ggplot2,scale_x_continuous)
importFrom(ggplot2,theme)
importFrom(graphics,strwidth)
importFrom(igraph,E)
importFrom(igraph,V)
importFrom(igraph,degree)
importFrom(igraph,graph_from_data_frame)
importFrom(igraph,layout_with_fr)
importFrom(methods,setClass)
importFrom(plyr,mapvalues)
importFrom(plyr,rbind.fill)
importFrom(reshape2,melt)
importFrom(stats,median)
importFrom(stats,p.adjust)
importFrom(stats,quantile)
importFrom(stats,t.test)
importFrom(stats,wilcox.test)