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add drop_na_cols parameter to format_sumstats() #68

add drop_na_cols parameter to format_sumstats()

add drop_na_cols parameter to format_sumstats() #68

Re-run triggered April 24, 2024 09:19
Status Failure
Total duration 6h 5m 10s
Artifacts 1

rworkflows.yml

on: pull_request
Matrix: rworkflows
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3 errors and 15 warnings
macOS-latest (latest)
R CMD check found WARNINGs
macOS-latest (latest)
Process completed with exit code 1.
ubuntu-latest (devel)
The job running on runner GitHub Actions 14 has exceeded the maximum execution time of 360 minutes.
macOS-latest (latest)
replacing previous import ‘utils::findMatches’ by ‘S4Vectors::findMatches’ when loading ‘SNPlocs.Hsapiens.dbSNP144.GRCh38’
macOS-latest (latest)
replacing previous import ‘utils::findMatches’ by ‘S4Vectors::findMatches’ when loading ‘SNPlocs.Hsapiens.dbSNP144.GRCh38’
macOS-latest (latest)
replacing previous import ‘utils::findMatches’ by ‘S4Vectors::findMatches’ when loading ‘SNPlocs.Hsapiens.dbSNP144.GRCh38’
macOS-latest (latest)
replacing previous import ‘utils::findMatches’ by ‘S4Vectors::findMatches’ when loading ‘SNPlocs.Hsapiens.dbSNP144.GRCh37’
macOS-latest (latest)
replacing previous import ‘utils::findMatches’ by ‘S4Vectors::findMatches’ when loading ‘SNPlocs.Hsapiens.dbSNP144.GRCh37’
macOS-latest (latest)
replacing previous import ‘utils::findMatches’ by ‘S4Vectors::findMatches’ when loading ‘SNPlocs.Hsapiens.dbSNP144.GRCh37’
macOS-latest (latest)
replacing previous import ‘utils::findMatches’ by ‘S4Vectors::findMatches’ when loading ‘SNPlocs.Hsapiens.dbSNP155.GRCh38’
macOS-latest (latest)
replacing previous import ‘utils::findMatches’ by ‘S4Vectors::findMatches’ when loading ‘SNPlocs.Hsapiens.dbSNP155.GRCh38’
macOS-latest (latest)
replacing previous import ‘utils::findMatches’ by ‘S4Vectors::findMatches’ when loading ‘SNPlocs.Hsapiens.dbSNP155.GRCh38’
macOS-latest (latest)
replacing previous import ‘utils::findMatches’ by ‘S4Vectors::findMatches’ when loading ‘SNPlocs.Hsapiens.dbSNP155.GRCh37’
macOS-latest (latest)
Unexpected input(s) 'free_disk_space', valid inputs are ['run_bioccheck', 'run_rcmdcheck', 'as_cran', 'run_vignettes', 'run_covr', 'run_pkgdown', 'has_testthat', 'has_runit', 'has_latex', 'tinytex_installer', 'tinytex_version', 'pandoc_version', 'run_docker', 'docker_registry', 'docker_user', 'docker_org', 'DOCKER_TOKEN', 'GITHUB_TOKEN', 'cache_version', 'runner_os', 'timeout', 'miniforge_variant', 'miniforge_version', 'activate_environment', 'environment_file', 'channels', 'free_diskspace']
macOS-latest (latest)
Unexpected input(s) 'free_disk_space', valid inputs are ['run_bioccheck', 'run_rcmdcheck', 'as_cran', 'run_vignettes', 'run_covr', 'run_pkgdown', 'has_testthat', 'has_runit', 'has_latex', 'tinytex_installer', 'tinytex_version', 'pandoc_version', 'run_docker', 'docker_registry', 'docker_user', 'docker_org', 'DOCKER_TOKEN', 'GITHUB_TOKEN', 'cache_version', 'runner_os', 'timeout', 'miniforge_variant', 'miniforge_version', 'activate_environment', 'environment_file', 'channels', 'free_diskspace']
ubuntu-latest (devel)
Runner GitHub Actions 14 did not respond to a cancelation request with 00:05:00.
ubuntu-latest (devel)
Unexpected input(s) 'free_disk_space', valid inputs are ['run_bioccheck', 'run_rcmdcheck', 'as_cran', 'run_vignettes', 'run_covr', 'run_pkgdown', 'has_testthat', 'has_runit', 'has_latex', 'tinytex_installer', 'tinytex_version', 'pandoc_version', 'run_docker', 'docker_registry', 'docker_user', 'docker_org', 'DOCKER_TOKEN', 'GITHUB_TOKEN', 'cache_version', 'runner_os', 'timeout', 'miniforge_variant', 'miniforge_version', 'activate_environment', 'environment_file', 'channels', 'free_diskspace']
Deprecation notice: v1, v2, and v3 of the artifact actions
The following artifacts were uploaded using a version of actions/upload-artifact that is scheduled for deprecation: "macOS-biocversion-release-r-latest-results". Please update your workflow to use v4 of the artifact actions. Learn more: https://github.blog/changelog/2024-04-16-deprecation-notice-v3-of-the-artifact-actions/

Artifacts

Produced during runtime
Name Size
macOS-biocversion-release-r-latest-results Expired
11.4 MB