Add rule to classify peptide bioactivity with the autopeptideml tool #61
Workflow file for this run
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name: run-demo-pipeline | |
# This workflow uses the Snakemake GitHub action to test that the Snakemake | |
# pipeline can be run in dryrun mode, as a sanity check | |
on: | |
push: | |
branches: | |
- main | |
pull_request: | |
branches: | |
- main | |
jobs: | |
run-demo-pipeline: | |
runs-on: ubuntu-latest | |
defaults: | |
run: | |
shell: bash -el {0} | |
steps: | |
- uses: actions/checkout@v3 | |
- name: Test workflow | |
uses: snakemake/[email protected] | |
with: | |
directory: . | |
snakefile: ./Snakefile | |
args: "--software-deployment-method conda --show-failed-logs -n" |