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14 Open 17 Closed
14 Open 17 Closed
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Issues list

kofamscan error
#61 opened Jul 25, 2024 by onbio
1
Process requirement exceeds available CPUs
#60 opened Jul 22, 2024 by onbio
7
error exit status 2
#59 opened Jun 18, 2024 by lagphase
6
converting the download/*_genome.csv files into a species list
#58 opened Mar 14, 2024 by taylorreiter
Bacterial Genera
#56 opened Oct 16, 2023 by Nimshika
6
Genomes from other than genbank/ncbi
#52 opened Jul 21, 2023 by Nimshika
7
swap out R url downloads for copies of files in github repo
#47 opened Jul 13, 2023 by taylorreiter
over time, develop filtering heuristics to systematically remove false positives that repeatedly crop up
#38 opened Jun 21, 2023 by taylorreiter
deal with email templating in nextflow
#29 opened Jun 2, 2023 by taylorreiter
consider adding user input of kingdom/NCBI taxonomy set for each genera
#22 opened May 25, 2023 by taylorreiter
implement sub-kingdom math from HGTphyloDetect
#21 opened May 24, 2023 by taylorreiter
PR roadmap for release 1
#17 opened May 23, 2023 by taylorreiter
15 of 16 tasks
update VOG db hmms to latest database version
#9 opened May 19, 2023 by taylorreiter
consider combining R parsing scripts into the same script/process
#31 opened May 18, 2023 by taylorreiter
ProTip! no:milestone will show everything without a milestone.