Merge Template update for nf-core/tools version 2.12 #161

Job	Run time
Test SISPA workflow (--gff false)	12m 42s
Run pipeline with test data (23.04.0)	23m 21s
Test SISPA workflow (--genome 'NC_045512.2')	14m 30s
Test Nanopore workflow (--gff false)	23m 10s
Run pipeline with test data (latest-everything)	26m 33s
Test Nanopore workflow (--input false)	21m 23s
Test workflow parameters (--consensus_caller ivar)	22m 18s
Test Nanopore workflow (--min_barcode_reads 10000)	1m 45s
Test workflow parameters (--variant_caller bcftools --consensus_caller ivar)	23m 44s
Test Nanopore workflow (--min_guppyplex_reads 10000)	3m 39s
Test workflow parameters (--skip_fastp --skip_pangolin)	24m 21s
Test Nanopore workflow (--artic_minion_caller medaka --sequencing_summary false --fast5_dir false)	27m 40s
Test workflow parameters (--skip_variants)	8m 37s
Test Nanopore workflow (--artic_minion_caller medaka --sequencing_summary false --fast5_dir false...	29m 25s
Test workflow parameters (--skip_cutadapt --skip_snpeff)	21m 23s
Test workflow parameters (--skip_kraken2)	23m 39s
Test workflow parameters (--skip_assembly)	20m 33s
Test workflow parameters (--spades_mode corona)	25m 53s
Test workflow parameters (--spades_mode metaviral)	22m 7s
Test workflow parameters (--skip_plasmidid false --skip_asciigenome)	24m 39s
	6h 41m 22s

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