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Update c3dc-model.yml #25

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Oct 19, 2023
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127 changes: 75 additions & 52 deletions model-desc/c3dc-model-props.yml
Original file line number Diff line number Diff line change
Expand Up @@ -1332,58 +1332,6 @@ PropDefinitions:
Type: integer
Req: false
Private: false
#event
event_id:
Desc: A unique identifier for an event
Term:
- Origin: caDSR
Code: '2534569'
Value: Additional Finding Identifier
Type: string
Req: true
Private: false
Key: true
#event
event_category:
Desc: Event category
Term:
- Origin: caDSR
Code: '7197400'
Value: A grouping of topic-variable values based on sponsor defined characteristics.
Type:
value_type: list
Enum:
- "Adverse Event"
- "Last Known Disease Status"
- "Comorbidity"
- "Disease Event"
- "Disease Response"
- "Other"
Req: true
Private: false
Key: false
#event
event_detail:
Desc: Event details or values or results
Term:
- Origin: caDSR
Code: '6642370'
Value: Result or Finding Original Result
Type: string
Req: true
Private: false
Key: false
#event
age_at_event:
Desc: Participant age at event
Term:
- Origin: caDSR
Code: '6412753'
Value: Age
Type: string
Req: true
Private: false
Key: false
#reference_file
reference_file_id:
Desc: A unique identifier for a clinical measure file.
Expand Down Expand Up @@ -2311,3 +2259,78 @@ PropDefinitions:
Type: string
Req: true
Private: false
survival_id:
Desc: A unique sequence of alphanumeric characters used to identify the survival event in the investigation or study.
Term:
- Origin: caDSR
Code: '14534325'
Value: CCDI Accession Number Identifier
Type: string
Req: true
Private: false
Key: true
last_known_survival_status:
Desc: Individual's vital status, indicating whether they are currently alive, deceased, or if their status remains unknown or unspecified.
Term:
- Origin: caDSR
Code: '2847330'
Value: Participant Vital Status Type
Type:
value_type: list
Enum:
- "Alive"
- "Dead"
- "Not Reported"
- "Unknown"
Req: true
Private: false
age_at_last_known_survival_status:
Desc: The age (in days) when the last known survival status of the subject was captured.
Term:
- Origin: caDSR
Code: '12305768'
Value: Subject Age at Last Known Survival Status Day Count
Type: integer
Req: true
Private: false
event_free_survival_status:
Desc: Identify the nature of the event that best characterizes the endpoint of the study.
Term:
- Origin: caDSR
Code: '3070936'
Value: Study End Point Event Type
Type:
value_type: list
Enum:
- "Censored"
- "Not Censored"
- "Not Reported"
- "Unknown"
Req: true
Private: false
age_at_event_free_survival_status:
Desc: Time from diagnosis to first event (or censoring), in days.
Term:
- Origin: caDSR
Code: '3229334'
Value: Study End Point Event Occurrence Day Count
Type: integer
Req: false
Private: false
first_event:
Desc: Identify the nature of the event that best characterizes the endpoint of the study.
Term:
- Origin: caDSR
Code: '3070936'
Value: Study End Point Event Type
Type:
value_type: list
Enum:
- "Progression"
- "Relapse"
- "Second Malignant Neoplasm"
- "Death"
- "Not Reported"
- "Unknown"
Req: true
Private: false
14 changes: 8 additions & 6 deletions model-desc/c3dc-model.yml
Original file line number Diff line number Diff line change
Expand Up @@ -14,12 +14,6 @@ Nodes:
- tumor_stage_clinical_t
- tumor_stage_clinical_n
- tumor_stage_clinical_m
event:
Props:
- event_id
- event_category
- event_detail
- age_at_event
participant:
Props:
- participant_id
Expand Down Expand Up @@ -58,6 +52,14 @@ Nodes:
- consent
- consent_number
- external_url
survival:
Props:
- survival_id
- last_known_survival_status
- age_at_last_known_survival_status
- event_free_survival_status
- age_at_event_free_survival_status
- first_event
reference_file:
Props:
- reference_file_id
Expand Down
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