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Broad Data Collection Template
Leandro Hermida edited this page Mar 1, 2016
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##Columns from ctd2.dashboard.metaEnrich.txt
- index_row = row index of the file
- cell_line_subset = measurements from a subset of cell lines (by lineage) used in enrichment calculation
- cell_line_exclusion = measurements from a subset of cell lines that were excluded from enrichment
- feature_dataset = database from which genetic feature was obtained
- compound_name = name of compound
- enriched_feature = genetic feature that correlates to enrichment_direction
- number_of_cell_lines = number of cell lines with genetic information for specific enrichment
- number_of_mutant_cell_lines = number of cell lines with alterations in this Enriched_Feature
- log_q_value_score = signed negative log (base 10) of false-discovery rate (FDR) q-value used to correct for multiple hypotheses
- resp_image_path = file path for compound response heatmap image
- feat_image_path = file path for genomic feature heatmap image
- compound_structure_path = file path for compound structure image
- NCI_portal = url to NCI portal location for source data
- GCT_path = file path (in the near future, this will be a URL from the portal) for data in GCT format for visualization using other applications