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Kokiri #53

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Kokiri #53

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Commits on May 15, 2022

  1. switch to lineup 4.6.0

    @keckelt
    keckelt committed May 15, 2022
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Commits on May 23, 2022

  1. also copy templates folder

    @keckelt
    keckelt committed May 23, 2022
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  2. add 2nd compare tasks

    @keckelt
    keckelt committed May 23, 2022
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  3. Merge remote-tracking branch 'origin/develop' into comparison

    @keckelt
    keckelt committed May 23, 2022
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  4. Merge branch 'develop' into comparison

    @keckelt
    keckelt committed May 23, 2022
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Commits on May 27, 2022

  1. Rename Tasks

    @keckelt
    keckelt committed May 27, 2022
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Commits on Jun 1, 2022

  1. Add Upset & Lineup

    @keckelt
    keckelt committed Jun 1, 2022
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  2. remove grouping by attribute

    @keckelt
    keckelt committed Jun 1, 2022
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Commits on Jun 2, 2022

  1. Custom Upset and defining Attributes

    @keckelt
    keckelt committed Jun 2, 2022
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  2. remove upset and refactor code

    @keckelt
    keckelt committed Jun 2, 2022
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  3. Merge branch 'develop' into comparison

    @keckelt
    keckelt committed Jun 2, 2022
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  4. exclude bloodline

    @keckelt
    keckelt committed Jun 2, 2022
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  5. move hardcoded exlcuded attributes to backend

    @keckelt
    keckelt committed Jun 2, 2022
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  6. adapt for mutated data

    @keckelt
    keckelt committed Jun 2, 2022
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  7. Show overlap with Jaccard Similarity

    @keckelt
    keckelt committed Jun 2, 2022
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  8. fix jaccard similarity 

    remove duplicate tissues
    @keckelt
    keckelt committed Jun 2, 2022
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  9. Shoe jaccard and exclusive share

    @keckelt
    keckelt committed Jun 2, 2022
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Commits on Jun 7, 2022

  1. show overlap with overlapping bars

    @keckelt
    keckelt committed Jun 7, 2022
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  2. change port

    @keckelt
    keckelt committed Jun 7, 2022
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Commits on Jun 8, 2022

  1. Access kokiri via proxy

    @keckelt
    keckelt committed Jun 8, 2022
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  2. remove localhost from url

    @keckelt
    keckelt committed Jun 8, 2022
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Commits on Jun 14, 2022

  1. Switch to Websockets

    @keckelt
    keckelt committed Jun 14, 2022
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Commits on Jun 15, 2022

  1. Add template files for custom lineup columns

    @keckelt
    keckelt committed Jun 15, 2022
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Commits on Jul 19, 2022

  1. show embedding and accuracy

    @keckelt
    keckelt committed Jul 19, 2022
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Commits on Jul 20, 2022

  1. support multiple charts

    @keckelt
    keckelt committed Jul 20, 2022
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  2. add d.ts

    @keckelt
    keckelt committed Jul 20, 2022
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  3. adapt plot size

    @keckelt
    keckelt committed Jul 20, 2022
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  4. fix label

    @keckelt
    keckelt committed Jul 20, 2022
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  5. hide category column if not needed

    @keckelt
    keckelt committed Jul 20, 2022
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Commits on Jul 21, 2022

  1. use d3v7 and d3v3 imports 

    remove depenencies to d3
add dependency to tdp_core
    @keckelt
    keckelt committed Jul 21, 2022
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  2. remove console log

    @keckelt
    keckelt committed Jul 21, 2022
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Commits on Jul 25, 2022

  1. Update layout, add parameters and OOB error

    @keckelt
    keckelt committed Jul 25, 2022
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  2. Make inputs more compact

    @keckelt
    keckelt committed Jul 25, 2022
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Commits on Jul 26, 2022

  1. Merge branch 'develop' into comparison

    @keckelt
    keckelt committed Jul 26, 2022
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  2. Merge branch 'comparison' into cmp_lineup_column

    @keckelt
    keckelt committed Jul 26, 2022
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  3. update code such that lineup updates

    @keckelt
    keckelt committed Jul 26, 2022
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  4. wider lineup for testing

    @keckelt
    keckelt committed Jul 26, 2022
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  5. show loading animation til distributions are visible

    @keckelt
    keckelt committed Jul 26, 2022
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  6. Merge branch 'd3_changes' into cmp_lineup_column

    @keckelt
    keckelt committed Jul 26, 2022
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  7. add distribution column

    @keckelt
    keckelt committed Jul 26, 2022
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Commits on Jul 27, 2022

  1. increase precision of importance column

    @keckelt
    keckelt committed Jul 27, 2022
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  2. try different filters

    @keckelt
    keckelt committed Jul 27, 2022
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Commits on Jul 28, 2022

  1. do 300 Trees

    @keckelt
    keckelt committed Jul 28, 2022
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  2. update layout and add confusions

    @keckelt
    keckelt committed Jul 28, 2022
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Commits on Aug 3, 2022

  1. switch to flex layout

    @keckelt
    keckelt committed Aug 3, 2022
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  2. add scatterplot heatmap 

    grow/shrink layout
    @keckelt
    keckelt committed Aug 3, 2022
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  3. add probability ranking

    @keckelt
    keckelt committed Aug 3, 2022
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Commits on Aug 4, 2022

  1. item ranking

    @keckelt
    keckelt committed Aug 4, 2022
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Commits on Aug 5, 2022

  1. increase view height

    @keckelt
    keckelt committed Aug 5, 2022
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  2. fix confusion bar chart

    @keckelt
    keckelt committed Aug 5, 2022
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Commits on Aug 9, 2022

  1. sync lineup selection to plot

    @keckelt
    keckelt committed Aug 9, 2022
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  2. switch canvas for scatterplot

    @keckelt
    keckelt committed Aug 9, 2022
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  3. adjust separator color

    @keckelt
    keckelt committed Aug 9, 2022
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  4. selection from plot

    @keckelt
    keckelt committed Aug 9, 2022
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  5. sort by lineup selection

    @keckelt
    keckelt committed Aug 9, 2022
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  6. add buttons to exclude/limit attribute

    @keckelt
    keckelt committed Aug 9, 2022
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  7. remove debug output from vega

    @keckelt
    keckelt committed Aug 9, 2022
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  8. add onboarding message

    @keckelt
    keckelt committed Aug 9, 2022
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  9. update style, add loading indicators, bump forest size

    @keckelt
    keckelt committed Aug 9, 2022
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  10. update/remove log messages

    @keckelt
    keckelt committed Aug 9, 2022
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Commits on Aug 11, 2022

  1. fill onboarding tooltip

    @keckelt
    keckelt committed Aug 11, 2022
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  2. minor style updates

    @keckelt
    keckelt committed Aug 11, 2022
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  3. Update tooltips for Characterize Operation

    @keckelt
    keckelt committed Aug 11, 2022
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  4. add cohort label to scatterplot tooltip

    @keckelt
    keckelt committed Aug 11, 2022
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Commits on Jan 12, 2023

  1. Update Kokiri branch (#52) 

    * Prepare github changes

* Remove circleci

* Release 3.1.0 (#42)

* prepare next dev version

* Fix colors assignment in plots (#41)

* Prepare github changes

* Remove circleci

* prepare release 3.1.0

* Update publish.yml

Co-authored-by: Klaus Eckelt <[email protected]>
Co-authored-by: anita-steiner <>
Co-authored-by: Anita Steiner <[email protected]>

* prepare next dev version

* Use `Font Awesome 6 Free` in `font-family` (#39)

* Use `Font Awesome 6 Free` in `font-family`

Requires datavisyn/tdp_core#732

* Update Lineup to 4.6.2

Co-authored-by: Klaus Eckelt <[email protected]>

* Update fontawesome

* Merge visyn_scripts

* Release 4.0.0 (#46)

* prepare next dev version

* Fix colors assignment in plots (#41)

* Prepare github changes

* Remove circleci

* prepare next dev version

* Use `Font Awesome 6 Free` in `font-family` (#39)

* Use `Font Awesome 6 Free` in `font-family`

Requires datavisyn/tdp_core#732

* Update Lineup to 4.6.2

Co-authored-by: Klaus Eckelt <[email protected]>

* Update fontawesome

* Merge visyn_scripts

* prepare release 4.0.0

Co-authored-by: Klaus Eckelt <[email protected]>
Co-authored-by: anita-steiner <>
Co-authored-by: Holger Stitz <[email protected]>

* prepare next dev version

* Merged `d3_changes` into `develop`  (#45)

* use d3v7 and d3v3 imports
remove depenencies to d3
add dependency to tdp_core

* remove console log

* Dev d3 merge fix (#47)

* move RouterScrollToTop to coral_public

* fix TS errors

* move canvas-confetti to coral_public

* update git dependencies

Co-authored-by: Klaus Eckelt <[email protected]>

* Automatically select root cohort if onboarding was already done (#48)

* Autoselect rootcohort if onboarding was done #579

* format code

* Remove grid lines from visualizations (#49)

remove gridlines #400

* fix type error

Co-authored-by: anita-steiner <>
Co-authored-by: Vanessa Stoiber <[email protected]>
Co-authored-by: Anita Steiner <[email protected]>
Co-authored-by: dvvanessastoiber <[email protected]>
Co-authored-by: Holger Stitz <[email protected]>
Co-authored-by: Patrick <[email protected]>
    @keckelt @dvvanessastoiber
    @thinkh @PatrickAdelberger
    6 people authored Jan 12, 2023
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Commits on Feb 9, 2023

  1. add checkbox to toggle imputation

    @keckelt
    keckelt committed Feb 9, 2023
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