Skip to content

Commit

Permalink
changelog
Browse files Browse the repository at this point in the history
  • Loading branch information
CamDavidsonPilon committed Mar 15, 2020
1 parent 562e00e commit 72613d8
Showing 1 changed file with 49 additions and 34 deletions.
83 changes: 49 additions & 34 deletions docs/Changelog.rst
Original file line number Diff line number Diff line change
@@ -1,6 +1,19 @@
Changelog
---------

0.24.2 - Unreleased
^^^^^^^^^^^^^^^^^^^

Bug fixes
'''''''''

- Fixed bug when no covariates were passed into ``CoxPHFitter``. See
#975
- Fixed error in ``StatisticalResult`` where the test name was not
displayed correctly.
- Fixed a keyword bug in ``plot_covariate_groups`` for parametric
models.

0.24.1 - 2020-03-05
^^^^^^^^^^^^^^^^^^^

Expand All @@ -10,6 +23,8 @@ New features
- Stability improvements for GeneralizedGammaRegressionFitter and
CoxPHFitter with spline estimation.

.. _bug-fixes-1:

Bug fixes
'''''''''

Expand All @@ -21,8 +36,8 @@ Bug fixes
^^^^^^^^^^^^^^^^^^^

This version and future versions of lifelines no longer support py35.
Pandas 1.0 is fully supported, along with previous version. Minimum
Scipy has been bumped to 1.2.0
Pandas 1.0 is fully supported, along with previous versions. Minimum
Scipy has been bumped to 1.2.0.

.. _new-features-1:

Expand All @@ -44,7 +59,7 @@ New features
- Univariate parametric models have a ``plot_density``,
``density_at_times``, and property ``density_`` that computes the
probability density function estimates.
- new dataset for interval regression involving C. Botulinum.
- new dataset for interval regression involving *C. Botulinum*.
- new ``lifelines.fitters.mixins.ProportionalHazardMixin`` that
implements proportional hazard checks.

Expand Down Expand Up @@ -74,7 +89,7 @@ API Changes
to ``scoring_method``.
- removed ``_score_`` and ``path`` from Cox model.

.. _bug-fixes-1:
.. _bug-fixes-2:

Bug fixes
'''''''''
Expand All @@ -92,7 +107,7 @@ Bug fixes
0.23.9 - 2020-01-28
^^^^^^^^^^^^^^^^^^^

.. _bug-fixes-2:
.. _bug-fixes-3:

Bug fixes
'''''''''
Expand All @@ -108,7 +123,7 @@ Bug fixes
0.23.8 - 2020-01-21
^^^^^^^^^^^^^^^^^^^

.. _bug-fixes-3:
.. _bug-fixes-4:

Bug fixes
'''''''''
Expand Down Expand Up @@ -159,7 +174,7 @@ New features
- New lymph node cancer dataset, originally from *H.F. for the German
Breast Cancer Study Group (GBSG) (1994)*

.. _bug-fixes-4:
.. _bug-fixes-5:

Bug fixes
'''''''''
Expand Down Expand Up @@ -188,7 +203,7 @@ New features

- ``StatisticalResult.print_summary`` supports html output.

.. _bug-fixes-5:
.. _bug-fixes-6:

Bug fixes
'''''''''
Expand All @@ -213,7 +228,7 @@ New features
- performance improvements on regression models’ preprocessing. Should
make datasets with high number of columns more performant.

.. _bug-fixes-6:
.. _bug-fixes-7:

Bug fixes
'''''''''
Expand All @@ -237,7 +252,7 @@ New features
- performance improvements for ``CoxPHFitter`` - up to 30% performance
improvements for some datasets.

.. _bug-fixes-7:
.. _bug-fixes-8:

Bug fixes
'''''''''
Expand All @@ -263,7 +278,7 @@ New features
Jupyter notebooks!
- silenced some warnings.

.. _bug-fixes-8:
.. _bug-fixes-9:

Bug fixes
'''''''''
Expand Down Expand Up @@ -293,7 +308,7 @@ API Changes
The tests were re-factored to be shipped with the package. Let me know
if this causes problems.

.. _bug-fixes-9:
.. _bug-fixes-10:

Bug fixes
'''''''''
Expand All @@ -308,7 +323,7 @@ Bug fixes
0.22.9 - 2019-10-30
^^^^^^^^^^^^^^^^^^^

.. _bug-fixes-10:
.. _bug-fixes-11:

Bug fixes
'''''''''
Expand All @@ -335,7 +350,7 @@ New features
- ``conditional_after`` now available in ``CoxPHFitter.predict_median``
- Suppressed some unimportant warnings.

.. _bug-fixes-11:
.. _bug-fixes-12:

Bug fixes
'''''''''
Expand All @@ -355,7 +370,7 @@ New features
- new ``ApproximationWarning`` to tell you if the package is making an
potentially mislead approximation.

.. _bug-fixes-12:
.. _bug-fixes-13:

Bug fixes
'''''''''
Expand Down Expand Up @@ -386,7 +401,7 @@ New features

- ``conditional_after`` works for ``CoxPHFitter`` prediction models 😅

.. _bug-fixes-13:
.. _bug-fixes-14:

Bug fixes
'''''''''
Expand Down Expand Up @@ -416,7 +431,7 @@ New features
weights.
- Better support for predicting on Pandas Series

.. _bug-fixes-14:
.. _bug-fixes-15:

Bug fixes
'''''''''
Expand Down Expand Up @@ -457,7 +472,7 @@ API changes
- ``KaplanMeierFitter.survival_function_``\ ‘s’ index is no longer
given the name “timeline”.

.. _bug-fixes-15:
.. _bug-fixes-16:

Bug fixes
'''''''''
Expand Down Expand Up @@ -494,7 +509,7 @@ API changes
gains only in Cox models, and only a small fraction of the API was
being used.

.. _bug-fixes-16:
.. _bug-fixes-17:

Bug fixes
'''''''''
Expand All @@ -518,7 +533,7 @@ New features

- lifelines is now compatible with scipy>=1.3.0

.. _bug-fixes-17:
.. _bug-fixes-18:

Bug fixes
'''''''''
Expand Down Expand Up @@ -562,7 +577,7 @@ API changes
``.print_summary`` includes confidence intervals for the exponential
of the value.

.. _bug-fixes-18:
.. _bug-fixes-19:

Bug fixes
'''''''''
Expand Down Expand Up @@ -611,7 +626,7 @@ API changes
could set ``fit_intercept`` to False and not have to set
``ancillary_df`` - now one must specify a DataFrame.

.. _bug-fixes-19:
.. _bug-fixes-20:

Bug fixes
'''''''''
Expand All @@ -634,7 +649,7 @@ New features

- ``scoring_method`` now a kwarg on ``sklearn_adapter``

.. _bug-fixes-20:
.. _bug-fixes-21:

Bug fixes
'''''''''
Expand Down Expand Up @@ -663,7 +678,7 @@ New features
- ``CoxPHFitter.check_assumptions`` now accepts a ``columns`` parameter
to specify only checking a subset of columns.

.. _bug-fixes-21:
.. _bug-fixes-22:

Bug fixes
'''''''''
Expand Down Expand Up @@ -699,7 +714,7 @@ API changes
- removing ``_compute_likelihood_ratio_test`` on regression models. Use
``log_likelihood_ratio_test`` now.

.. _bug-fixes-22:
.. _bug-fixes-23:

Bug fixes
'''''''''
Expand All @@ -726,7 +741,7 @@ API changes
- output of ``survival_table_from_events`` when collapsing rows to
intervals now removes the “aggregate” column multi-index.

.. _bug-fixes-23:
.. _bug-fixes-24:

Bug fixes
'''''''''
Expand Down Expand Up @@ -763,7 +778,7 @@ API changes
- ``entries`` property in multivariate parametric models has a new
Series name: ``entry``

.. _bug-fixes-24:
.. _bug-fixes-25:

Bug fixes
'''''''''
Expand Down Expand Up @@ -795,7 +810,7 @@ API changes
- in ``AalenJohansenFitter``, the ``variance`` parameter is renamed to
``variance_`` to align with the usual lifelines convention.

.. _bug-fixes-25:
.. _bug-fixes-26:

Bug fixes
'''''''''
Expand Down Expand Up @@ -828,7 +843,7 @@ API changes
- Pandas is now correctly pinned to >= 0.23.0. This was always the
case, but not specified in setup.py correctly.

.. _bug-fixes-26:
.. _bug-fixes-27:

Bug fixes
'''''''''
Expand Down Expand Up @@ -884,7 +899,7 @@ API changes
@vpolimenov!
- The ``C`` column in ``load_lcd`` dataset is renamed to ``E``.

.. _bug-fixes-27:
.. _bug-fixes-28:

Bug fixes
'''''''''
Expand Down Expand Up @@ -953,7 +968,7 @@ API changes
transposed now (previous parameters where columns, now parameters are
rows).

.. _bug-fixes-28:
.. _bug-fixes-29:

Bug fixes
'''''''''
Expand All @@ -980,7 +995,7 @@ New features
0.19.4 - 2019-02-25
^^^^^^^^^^^^^^^^^^^

.. _bug-fixes-29:
.. _bug-fixes-30:

Bug fixes
'''''''''
Expand Down Expand Up @@ -1017,7 +1032,7 @@ New features
- ``ParametricUnivariateFitters``, like ``WeibullFitter``, have
smoothed plots when plotting (vs stepped plots)

.. _bug-fixes-30:
.. _bug-fixes-31:

Bug fixes
'''''''''
Expand Down Expand Up @@ -1093,7 +1108,7 @@ API changes
means that the *default* for alpha is set to 0.05 in the latest
lifelines, instead of 0.95 in previous versions.

.. _bug-fixes-31:
.. _bug-fixes-32:

Bug Fixes
'''''''''
Expand Down

0 comments on commit 72613d8

Please sign in to comment.