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Always add reads for negative controls - NovaSeq X v1 WF #524

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karlnyr opened this issue Sep 4, 2024 · 3 comments
Closed

Always add reads for negative controls - NovaSeq X v1 WF #524

karlnyr opened this issue Sep 4, 2024 · 3 comments

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@karlnyr
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karlnyr commented Sep 4, 2024

We want to always add the number of reads to negative controls in the in NovaSeq X v1 workflow. We do not need to address the NovaSeq v3 workflow as we do not handle negative controls in this workflow any longer.


For definitions of headings below see Basic Concepts.

Work Flow: NovaSeq X v1
Protocol: NovaSeq X v1
Step: Bcl Conversion & Demultiplexing (NovaSeq X)

We want to always add the number of reads, from previous and current sequencing runs, to a sample in the NovaSeq X v1 WF.

@karlnyr
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karlnyr commented Sep 4, 2024

Once this issue is closed, we can revert the revert done in: Clinical-Genomics/cg#3689

@karlnyr
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karlnyr commented Sep 4, 2024

and close Clinical-Genomics/cg#2871

@Karl-Svard
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Karl-Svard commented Sep 25, 2024

fixed in #531

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