pl-s3path

Abstract

A CUBE 'ds' plugin to adapt pl-pacsquery output to pl-s3retrieve input.

Preconditions

Input must contain success.txt generated by the pl-pacsquery plugin.

Run

Using docker run

docker run -t --rm
  -v $(pwd)/../pl-pacsquery/out:/input \
  -v $(pwd)/output:/output             \
  fnndsc/pl-s3path s3path.py           \
  --seriesUIDS 0                       \
  /input /output