Fix dock_image #47
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| name: Source | |
| on: | |
| push: | |
| branches: | |
| - src | |
| pull_request: | |
| branches: | |
| - src | |
| jobs: | |
| local: | |
| name: Local test | |
| runs-on: ubuntu-20.04 | |
| strategy: | |
| matrix: | |
| python-version: [ '3.8.2', '3.9', '3.10', '3.11', '3.12' ] | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Configure git | |
| run: | | |
| git config --global user.email "[email protected]" | |
| git config --global user.name "FNNDSC in Github Actions" | |
| - name: Run ./bootstrap.sh | |
| run: | | |
| sed -i -e 's/#READY=yes/READY=yes/' bootstrap.sh | |
| ./bootstrap.sh | |
| - name: Generated unit tests | |
| run: | | |
| source venv/bin/activate | |
| pytest | |
| - name: Run program | |
| run: | | |
| source venv/bin/activate | |
| mkdir /tmp/incoming | |
| echo 'on-the-metal test is very testy test test' > /tmp/incoming/ghaction.txt | |
| commandname --word 'test' /tmp/incoming /tmp/outgoing | |
| if ! [ -e '/tmp/outgoing/ghaction.count.txt' ]; then | |
| echo "Contents of /tmp/outgoing: " /tmp/outgoing/* | |
| echo "::error ::File outgoing/ghaction.count.txt was not created." | |
| fi | |
| rm -rvf /tmp/incoming /tmp/outgoing | |
| integration: | |
| name: Integration tests | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Edit code | |
| run: | | |
| git config --global user.email "[email protected]" | |
| git config --global user.name "FNNDSC in Github Actions" | |
| temp_file=$(mktemp) | |
| sed 's/#READY=yes/READY=yes/' bootstrap.sh \ | |
| | sed 's/^PLUGIN_NAME=.*/PLUGIN_NAME=pl-ghactions-testtemplate/' \ | |
| | sed 's/^SCRIPT_NAME=.*/SCRIPT_NAME=ghtest_template/' \ | |
| | sed 's/^PLUGIN_TITLE=.*/PLUGIN_TITLE="A test in GH Actions"/' \ | |
| > $temp_file | |
| mv $temp_file ./bootstrap.sh | |
| chmod +x bootstrap.sh | |
| ./bootstrap.sh | |
| if ! [ -f ghtest_template.py ]; then | |
| echo "::error ::File ghtest_template.py was not created." | |
| exit 1 | |
| fi | |
| # change the version of this ChRIS plugin | |
| sed -i -e 's/^__version__ = .*/__version__ = "1.2.3"/' ghtest_template.py | |
| - name: Build image | |
| run: docker build -t localhost/fnndsc/pl-ghactions-testtemplate:1.2.3 . | |
| - name: Spin up ChRIS | |
| uses: FNNDSC/miniChRIS-docker@master | |
| with: | |
| plugins: localhost/fnndsc/pl-ghactions-testtemplate:1.2.3 | |
| - name: Assert plugin registered | |
| run: | | |
| qs='name_exact=pl-ghactions-testtemplate&version=1.2.3' | |
| res="$( | |
| curl -u 'chris:chris1234' \ | |
| -H 'Accept: application/json' \ | |
| "http://localhost:8000/api/v1/plugins/search/?$qs" | |
| )" | |
| count="$(jq -r '.count' <<< "$res")" | |
| if [ "$count" != '1' ]; then | |
| echo "::error ::expected count=1" | |
| echo "$res" | |
| exit 1 | |
| fi | |
| push: | |
| name: Push to main | |
| if: github.event_name == 'push' | |
| runs-on: ubuntu-latest | |
| needs: [ local, integration ] | |
| steps: | |
| - name: Git checkout | |
| uses: actions/checkout@v4 | |
| with: | |
| persist-credentials: false | |
| fetch-depth: 0 | |
| - name: Configure git | |
| run: | | |
| git config --local user.email "github-actions[bot]@users.noreply.github.com" | |
| git config --local user.name "github-actions[bot]" | |
| - name: Merge ref into main | |
| run: | | |
| git switch main | |
| set +e | |
| output="$(git merge --no-ff --no-commit ${{ github.ref }})" | |
| set -e | |
| echo "$output" | |
| # ignore merge conflicts to this file | |
| filtered="$(sed '/CONFLICT (modify\/delete): \.github\/workflows\/src\.yml/d' <<< "$output")" | |
| if ( echo "$filtered" | grep -Fq CONFLICT ); then | |
| echo "::error ::Unacceptable merge conflict. Someone changed main, please merge manually." | |
| exit 1 | |
| fi | |
| # Important! Deletes this Github workflow file | |
| if [ -e .github/workflows/src.yml ]; then | |
| git rm --force .github/workflows/src.yml | |
| fi | |
| git commit --no-edit | |
| - name: Push to main | |
| uses: ad-m/github-push-action@552c074ed701137ebd2bf098e70c394ca293e87f | |
| with: | |
| github_token: ${{ secrets.GITHUB_TOKEN }} | |
| branch: main |