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Run combined tests for fine, geokit and glaes #4

Run combined tests for fine, geokit and glaes

Run combined tests for fine, geokit and glaes #4

name: Run combined tests for fine, geokit and glaes
on:
workflow_dispatch:
inputs:
tags:
description: 'Manual run'
push:
branches:
- main
pull_request:
branches:
- main
# Allows to trigger the workflow manually
schedule:
# * is a special character in YAML so you have to quote this string
# Some Examples for cron syntax https://crontab.guru/examples.html
# Schedules job at any point after 12 pm
- cron: '0 0 * * *'
# Weekly after sunday
# - cron: 0 0 * * 0
jobs:
TestCombinedInstalaltions:
name: Test on ${{ matrix.os }})
runs-on: ${{ matrix.os }}
strategy:
fail-fast: false
matrix:
# os: ["ubuntu-latest","ubuntu-20.04", "macos-latest","macos-13","macos-12", "macos-11","windows-latest","windows-2019"]
os: ["ubuntu-latest"]
steps:
- uses: conda-incubator/setup-miniconda@v3
with:
miniforge-version: latest
channels: conda-forge
activate-environment: test_env
- name: Install libraries
shell: pwsh
id: install-step
run: |
ls
echo "LS Done"
mamba install -v -n test_env fine geokit glaes reskit pytest=6.2.4 scikit-learn=1.1.3
echo "Installation done"
conda list -n test_env
echo "libaries printed"
- name: Get fine version
shell: pwsh
id: fine-version
run: |
$FINE_STRING = conda list -e -n test_env fine | Out-String
echo the fine string is $FINE_STRING
$FINE_VERSION = [regex]::Match($FINE_STRING, 'fine=(\d+\.\d+\.\d+)=').Groups[1].Value
echo "FINE_VERSION_NUMBER=$FINE_VERSION" >> $GITHUB_OUTPUT
echo $FINE_VERSION_NUMBER
echo "FINE_VERSION_NUMBER_WITH_V=v$FINE_VERSION" >> $GITHUB_OUTPUT
echo $FINE_VERSION_NUMBER_WITH_V
- name: Get fine version
shell: pwsh
id: other-version
run: |
$GEOKIT_STRING = conda list -e -n test_env geokit | Out-String
echo The geokit string is $GEOKIT_STRING
$GEOKIT_VERSION = [regex]::Match($GEOKIT_STRING, 'geokit=(\d+\.\d+\.\d+)=').Groups[1].Value
echo "GEOKIT_VERSION=$GEOKIT_VERSION" >> $GITHUB_OUTPUT
echo Geokit version: $GEOKIT_VERSION
$GLAES_STRING = conda list -e -n test_env geokit | Out-String
echo The glaes string is $GLAES_STRING
$GLAES_VERSION = [regex]::Match($GLAES_STRING, 'glaes=(\d+\.\d+\.\d+)=').Groups[1].Value
echo "GLAES_VERSION=$GLAES_VERSION" >> $GITHUB_OUTPUT
echo Glaes Version: $GLAES_VERSION
- name: Checkout Fine
uses: actions/checkout@v4
with:
repository: FZJ-IEK3-VSA/FINE
path: './fine'
ref: ${{ steps.fine-version.outputs.FINE_VERSION_NUMBER_WITH_V }}
fetch-depth: 0
- name: Checkout geokit
uses: actions/checkout@v4
with:
repository: FZJ-IEK3-VSA/geokit
path: './geokit'
ref: ${{ steps.other-version.outputs.GEOKIT_VERSION }}
fetch-depth: 0
- name: Checkout glaes
uses: actions/checkout@v4
with:
repository: FZJ-IEK3-VSA/glaes
path: './glaes'
ref: ${{ steps.other-version.outputs.GLAES_VERSION }}
fetch-depth: 0
- name: Checkout Reskit
uses: actions/checkout@v4
with:
repository: FZJ-IEK3-VSA/RESKit
path: './reskit'
ref: ${{ steps.other-version.outputs.RESKIT_VERSION }}
fetch-depth: 0
- name: Run pytest for fine
shell: pwsh
run: |
echo "Start ls"
ls
echo "ls terminated"
cd fine
echo "start pytest"
conda run -n test_env python -m pytest test/
echo "Pytest done"
- name: Run pytest for geokit
shell: pwsh
run: |
echo "Start ls"
ls
echo "ls terminated"
cd geokit
echo "start pytest"
conda run -n test_env python -m pytest
echo "Pytest done"
- name: Run pytest for glaes
shell: pwsh
run: |
echo "Start ls"
ls
echo "ls terminated"
cd glaes
echo "start pytest"
conda run -n test_env python -m pytest
echo "Pytest done"