1.2.0

✨ New Features

• 7130462 - Augmented Lagrangian (slip and open modes) (PR #3217 by @matteofrigo5)
• 1616ea4 - minimum interval for time-step increase after time-step cut (PR #3338 by @victorapm)
• 0db85be - Log refactor - Output PVT (PR #3149 by @arng40)
  • ↘️ addresses issue #3013 opened by @MelReyCG

🐛 Bug Fixes

• eb7c6b2 - Remove shadow declarations (PR #3293 by @dkachuma)
• f9a64bb - testLifoStorage random fail on RockyLinux with clang+CUDA (PR #3362 by @sframba)

♻️ Refactors

• 7ff2349 - mixture density computation in multiphase poromechanics solvers (PR #3342 by @castelletto1)
• 258f072 - Trying to improve adaptive linear solver tolerance selection (PR #3163 by @paveltomin)

👷 Build System

• 5368ee3 - deps: bump the github-actions group with 2 updates (PR #3324 by @dependabot[bot])
• 08d5eeb - update Mathpresso (PR #3360 by @rrsettgast)
• db0bd1c - split ci into atomic workflows (commit by @untereiner)
• 390dc3a - update to reflect recent changes (commit by @untereiner)
• 2c69a61 - test next version computation (commit by @untereiner)
• 6c4107f - draft: test next version computation in the PR (commit by @untereiner)
• 9b301e1 - draft: test release notes computation (commit by @untereiner)
• 8fbc3b9 - draft: test release notes print in terminal (commit by @untereiner)
• 77a6509 - draft: new deployment workflow (commit by @untereiner)

📝 Documentation Changes

• c225416 - Move table titles from CompleteXMLSchema.rst to corresponding include file (PR #3321 by @ryar9534)
  • ↘️ addresses issue #3316 opened by @ryar9534

v1.1.0

What's Changed

• Docs for cased wellbore with Thermal debonding by @sytuannguyen in #2515
• updated integratedTests submodule by @tbeltzun in #2778
• Adding an error when input temperature / pressure is out of PVT tables range by @MelReyCG in #2552
• A review of the docs for solid constitutive models by @sytuannguyen in #2606
• Solve reappearing compilation issue on PPC machines with NVCC due to FMT bug by @sframba in #2759
• prevent SIGFPE in vtk by @tbeltzun in #2718
• Reenabling sphinx imgmath by @cssherman in #2780
• Tune the hydrofrac example so that it at least runs by @paveltomin in #2763
• Fix integratedTests failures. by @CusiniM in #2785
• Refactor fluid unit tests by @dkachuma in #2695
• Compositional tidy up by @dkachuma in #2661
• Add gcc compiler to nightly tests by @bmhan12 in #2692
• Add a few solver options plus some useful output for hydrofrac solver by @paveltomin in #2762
• Allow negative pressure by default (revert change from #2762) by @paveltomin in #2787
• Merge SolidMechanicsStateReset into PoromechanicsInitialization to simplify users life by @paveltomin in #2735
• Update TPL tag to point back to the HEAD of the repo by @TotoGaz in #2791
• Activate sccache in the CI/CD by @TotoGaz in #2760
• Add more context to errors - mesh/ files by @MelReyCG in #2450
• Re-Enable anisotropic constitutive models by @sytuannguyen in #2749
• Some formulation options by @paveltomin in #2546
• rewrite seismo traces - rework WaveSolverBase structure by @tbeltzun in #2729
• Remove unused variables by @dkachuma in #2797
• Add phase composition to PVTDriver output by @dkachuma in #2772
• Create compositional multiphase fluid by @dkachuma in #2769
• Bugfix/crook5/mpm restart by @cmcrook5 in #2782
• Support wells in sequential poromechanics + 3 other PRs by @paveltomin in #2568
• Fixes and enhancements to frac permeability models by @CusiniM in #2757
• Reorganization of the GHA files by @TotoGaz in #2801
• Well skin factor by @kimtaeho07 in #2599
• Upgrade version of sccache for GPU builds by @TotoGaz in #2829
• Feature in-tree external components by @untereiner in #2527
• allow empty source and receivers by @tbeltzun in #2818
• MGR strategies cleanup by @castelletto1 in #2409
• Use ComponentProperties in calculation functions by @dkachuma in #2799
• add NDEBUG test - add build_test target - fix asserts by @tbeltzun in #2721
• More precise XML input values validation by @MelReyCG in #2764
• Bugfix/castelletto1/mgr by @castelletto1 in #2855
• Fix integratedTests fails. by @CusiniM in #2864
• add missing baselines updates by @rrsettgast in #2865
• Update logLevel usage in MGR by @victorapm in #2815
• Dissipation by @rasimHZ in #2660
• Bugfix: remove table path from restart files. by @CusiniM in #2869
• Run the integrated tests on GHA by @TotoGaz in #2850
• Redid ArrayOfArraysView::setCapacityOfArray to avoid move by @corbett5 in #2870
• Use GHA's if: instead of dedicated jobs by @TotoGaz in #2872
• A few solver messages rework by @MelReyCG in #2783
• Implement STONE II model for three phase relperm interpolation by @jafranc in #2525
• Simple fixes for issues #2834 and #2839 by @paveltomin in #2841
• Properly reactivate PVT throwing by @MelReyCG in #2798
• A few mesh messages edit by @MelReyCG in #2844
• Fix Issue #2833 and #2755 by @jhuang2601 in #2859
• Remove value only compute method from fluid models by @dkachuma in #2802
• Enhance the fracture generation feature of mesh_doctor by @TotoGaz in #2793
• Updating error checking in python setup script by @cssherman in #2825
• Disable auto updating of docs/doxygen/GeosxConfig.hpp by @klevzoff in #2602
• Cleanup compositional fluid model by @dkachuma in #2812
• IO: filter mesh levels for VTK by @tbeltzun in #2723
• Fixes for brine density computes, output internally constructed PVT tables for CO2 fluid into CSV files by @paveltomin in #2792
• Fix issues #2837 and #2838 by @paveltomin in #2843
• Address the issue #2407 by @sytuannguyen in #2809
• Fix issue #2882 by using output dir in wells rates output by @paveltomin in #2884
• fix elastic seismos bug by @tbeltzun in #2849
• SourceFlux & RegionStatistics crash fixes by @MelReyCG in #2842
• Fix Rachford-Rice solver by @dkachuma in #2854
• Fix minCompDens by @victorapm in #2889
• Gitlab CI - cleanup untracked files by @bmhan12 in #2892
• Computing next time-step size from CFL by @jafranc in #2600
• Aitken relaxation on averageMeanTotalStressIncrement by @sohailwaziri in #2628
• Revert target region check accidentally commented in #2568 by @paveltomin in #2893
• Simulation duration output fix + timestep separator by @MelReyCG in #2877
• RAJA loop_exec deprecated for seq_exec by @wrtobin in #2890
• Define a single quadrature point for FaceElements by @CusiniM in #2784
• Include water vapourisation in CO2/Brine flash by @dkachuma in #2811
• Time step cut support for sequential solver by @paveltomin in #2861
• acoustic - elastic coupling (SEM, 2ⁿᵈ order wave equation) by @tbeltzun in #2813
• Fix issue #2871 by @paveltomin in #2916
• Poromechanics solvers cleanup by @paveltomin in #2913
• fix multiple tutorial problems by @jhuang2601 in #2920
• Some random flow solver cleanup by @paveltomin in #2921
• Correct errors in wave propagation xml files by @sframba in #2911
• Fix a typo in Example2.rst by @sytuannguyen in #2931
• Fix compilation issues and PVT Driver unit test on Pangea3 by @sframba in #2910
• Updating paths to data repo by @castelletto1 in #2934
• Fix function interface for poroVisoPlastic models by @jhuang2601 in #2696
• Fix the naming of the fluid heat capacity by @frankfeifan in #2924
• generate code coverage reports by @tbeltzun in #2738
• Add action trigger for push to develop by @rrsettgast in #2943
• Migrate python packages by @cssherman in #2896
• Apply min comp dens treatment for initial conditions by @paveltomin in #2938
• More single phase outputs by @MelReyCG in #2904
• Poroelastic frac propagation criterion: use total stress to compute force balance. by @CusiniM in #2706
• Add csv output also for singe phase flow and unify a bit between different statistics outputs by @paveltomin in #2914
• Fix for black oil by @paveltomin in #2937
• Misc cleanup of CI and README by @rrsettgast in #2944
• Use LvArray::math functions by @untereiner in #2927
• Spack Update by @bmhan12 in #2028
• find bug ...

v1.0.1

What's Changed

• Fix potential difference calculations in molar variables by @francoishamon in #1228
• Unit testing on Lassen - Laplace2D with serial direct solver by @castelletto1 in #1239
• Compile mathpresso targets iff mathpresso option is requested. by @TotoGaz in #1246
• Improving lagrangian contact mechanics solver + LAI capabilities by @andrea-franceschini in #986
• change workflow documentation by @rrsettgast in #1244
• Provide docker solution to docker restriction by @TotoGaz in #1247
• Adding an mesh tools python package for GEOSX by @cssherman in #1224
• Improvements to EFEM solver. by @CusiniM in #1147
• LC Spack Support by @corbett5 in #1204
• Fixed bug in averageOverSecondDim with 1D arrays. by @corbett5 in #1250
• Implemented dispatch for mimetic inner product selection by @francoishamon in #1190
• WIP - Add Debug CUDA build to Travis CI by @bmhan12 in #1252
• Updates to Phase-Field Fracture - Stress Decomposition and Nonlinear Degradation Functions by @andrembcosta in #1144
• config-build works with Python3 by @corbett5 in #1251
• Fixed bug related to matching perforations to reservoir elements by @francoishamon in #1206
• Fixed bug linking to system tpls. by @corbett5 in #1265
• Fix missing blob on GCP by @TotoGaz in #1276
• Virtual Element Method by @andrea-borio in #1220
• Travis Cuda Clang Debug Build by @bmhan12 in #1270
• Fixing wrong buffer in test. by @TotoGaz in #1281
• Re-enable pinned memory. by @corbett5 in #1283
• Update Hypre and CHAI TPLs by @rrsettgast in #1282
• Fix to default destructor missing by @herve-gross in #1268
• Correct a typo: sparisty by @sytuannguyen in #1271
• Using clang-tidy to correct legacy namings by @TotoGaz in #1286
• Removed Doxygen warnings on Quartz by @francoishamon in #1293
• Minor cameBack correction by @TotoGaz in #1294
• fix incorrectly reverted LvArray submodule by @rrsettgast in #1295
• Bugfix/sytuan/pangea build by @sytuannguyen in #1253
• Remove redundant member variables in LaplaceFEM solver by @sytuannguyen in #1298
• Apply renaming to function calls from Petsc LAI by @klevzoff in #1300
• Fix to boundedPlane to avoid missing some embedded elements. by @CusiniM in #1304
• Replace std::string with string by @rrsettgast in #1301
• Updating publications.rst by @joshua-white in #1287
• Fixed crash in SinglePhaseFVM with wells and fractures by @francoishamon in #1306
• Apply renaming to update functions in CompositionalMultiphaseFlowKernels by @francoishamon in #1310
• Modified well controls to match Intersect results by @francoishamon in #1202
• Update TPL by @TotoGaz in #1314
• Update TPL by @TotoGaz in #1315
• Update submodule BLT to v0.3.6 by @TotoGaz in #1316
• Improve logs when product is not found in catalog. by @TotoGaz in #1305
• Python interface by @corbett5 in #1068
• Poroelasticity with embedded fractures by @CusiniM in #1229
• Adding Drucker-Prager plasticity model by @joshua-white in #974
• Implement relative permeabilities with tables on device by @francoishamon in #1277
• Corbett/references and exceptions by @corbett5 in #1318
• Add hybrid FVM compositional multiphase solver by @francoishamon in #901
• Updated Build Guide by @klevzoff in #1332
• Fix Debug-build compile fail on Lassen by @wrtobin in #1337
• Update CO2-brine model documentation by @francoishamon in #1330
• Enable uncrustify for Pangea by @sytuannguyen in #1339
• Fixed bug in the computation of the Peaceman index by @francoishamon in #1341
• Re-enable Doxygen on Travis and fix existing warnings by @klevzoff in #1345
• Update Caliper.rst by @corbett5 in #1346
• Process external components after core components. by @corbett5 in #1347
• Fix VTK output to put plot files under output path by @klevzoff in #1343
• boomerAMG on GPU for SolidMechanicsLagrangianSSLE by @castelletto1 in #1054
• Implemented Dead-Oil model working on device by @francoishamon in #1313
• Adding asyncronous kernel launching and restructuring the CommunicationTools routines to expose more async to allow for latency hiding by @wrtobin in #1319
• update TPLs for Pangea build by @sytuannguyen in #1358
• Kernels for poroelastic solvers by @castelletto1 in #1353
• Implement CO2Brine model on GPU by @francoishamon in #1325
• Small fixes to tutorials. by @CusiniM in #1365
• Changes for Summit. by @corbett5 in #1367
• Fixed debug compilation on Lassen by @francoishamon in #1368
• Removing dead code + tiny cleanings by @TotoGaz in #1373
• Reducing visibility of neighborRank in NeighborCommunicator by @TotoGaz in #1375
• Low order acoustic wave equation by @mndiaye24 in #1269
• Feature/borio/vem refactoring by @andrea-borio in #1288
• Fixed compilation warning with clang+hypreGPU on Lassen by @francoishamon in #1380
• WIP - circular dependencies / object libraries build by @bmhan12 in #1352
• Linear algebra cleanup by @klevzoff in #1363
• Update Caliper.rst by @corbett5 in #1391
• PVTPackage and PAMELA submodule names by @rrsettgast in #1396
• Bugfixes for CUDA build (multiphase model kernel wrappers, HypreVector::extract) by @klevzoff in #1397
• Device Packing Optimization by @wrtobin in #1382
• Update host config to resolve Pangea build issue by @sytuannguyen in #1395
• Fix silo output issue #1186 by @sytuannguyen in #1400
• Bugfix/hypre lai by @castelletto1 in #1403
• Parallel synchronization of new embedded surfaces. by @CusiniM in #1354
• Wrong cast in PTP by @TotoGaz in #1404
• Feature/wellbore mesh, Traction BC, convert {tensor input} by @rrsettgast in #1393
• add missing internal wellbore mesh integrated test baselines by @rrsettgast in #1406
• Adding a script to test for xml attribute coverage by @cssherman in #1102
• Adding timestamp information required by visit to vtk files by @cssherman in #1407
• Add LaplaceBase class by @andrea-borio in #1385
• Add pygeosx_tools python package by @cssherman in #1362
• Triaxial Driver by @joshua-white in #1364
• Cleanup of NeighborCommunicator by @rrsettgast in #1414
• LvArray update. by @corbett5 in #1410
• Changed how the finite element kernel objects are constructed. by @corbett5 in #1340
• DofManager cleanup by @klevzoff in #1412
• Cleanup TractionBoundaryCondition by @klevzoff in #1426
• Corbett/hypre cuda fix by @corbett5 in #1441
• Adds support for hypre-cuda via spack. by @corbett5 in #1445
• Fixed bug in compositional residual norm calculation with multiple regions by @francoishamon in https://github.com/GE...

v0.2.1-alpha

This is a pre-release created for the purpose of generating a DOI

What's Changed

• Fix potential difference calculations in molar variables by @francoishamon in #1228
• Unit testing on Lassen - Laplace2D with serial direct solver by @castelletto1 in #1239
• Compile mathpresso targets iff mathpresso option is requested. by @TotoGaz in #1246
• Improving lagrangian contact mechanics solver + LAI capabilities by @andrea-franceschini in #986
• change workflow documentation by @rrsettgast in #1244
• Provide docker solution to docker restriction by @TotoGaz in #1247
• Adding an mesh tools python package for GEOSX by @cssherman in #1224
• Improvements to EFEM solver. by @CusiniM in #1147
• LC Spack Support by @corbett5 in #1204
• Fixed bug in averageOverSecondDim with 1D arrays. by @corbett5 in #1250
• Implemented dispatch for mimetic inner product selection by @francoishamon in #1190
• WIP - Add Debug CUDA build to Travis CI by @bmhan12 in #1252
• Updates to Phase-Field Fracture - Stress Decomposition and Nonlinear Degradation Functions by @andrembcosta in #1144
• config-build works with Python3 by @corbett5 in #1251
• Fixed bug related to matching perforations to reservoir elements by @francoishamon in #1206
• Fixed bug linking to system tpls. by @corbett5 in #1265
• Fix missing blob on GCP by @TotoGaz in #1276
• Virtual Element Method by @andrea-borio in #1220
• Travis Cuda Clang Debug Build by @bmhan12 in #1270
• Fixing wrong buffer in test. by @TotoGaz in #1281
• Re-enable pinned memory. by @corbett5 in #1283
• Update Hypre and CHAI TPLs by @rrsettgast in #1282
• Fix to default destructor missing by @herve-gross in #1268
• Correct a typo: sparisty by @sytuannguyen in #1271
• Using clang-tidy to correct legacy namings by @TotoGaz in #1286
• Removed Doxygen warnings on Quartz by @francoishamon in #1293
• Minor cameBack correction by @TotoGaz in #1294
• fix incorrectly reverted LvArray submodule by @rrsettgast in #1295
• Bugfix/sytuan/pangea build by @sytuannguyen in #1253
• Remove redundant member variables in LaplaceFEM solver by @sytuannguyen in #1298
• Apply renaming to function calls from Petsc LAI by @klevzoff in #1300
• Fix to boundedPlane to avoid missing some embedded elements. by @CusiniM in #1304
• Replace std::string with string by @rrsettgast in #1301
• Updating publications.rst by @joshua-white in #1287
• Fixed crash in SinglePhaseFVM with wells and fractures by @francoishamon in #1306
• Apply renaming to update functions in CompositionalMultiphaseFlowKernels by @francoishamon in #1310
• Modified well controls to match Intersect results by @francoishamon in #1202
• Update TPL by @TotoGaz in #1314
• Update TPL by @TotoGaz in #1315
• Update submodule BLT to v0.3.6 by @TotoGaz in #1316
• Improve logs when product is not found in catalog. by @TotoGaz in #1305
• Python interface by @corbett5 in #1068
• Poroelasticity with embedded fractures by @CusiniM in #1229
• Adding Drucker-Prager plasticity model by @joshua-white in #974
• Implement relative permeabilities with tables on device by @francoishamon in #1277
• Corbett/references and exceptions by @corbett5 in #1318
• Add hybrid FVM compositional multiphase solver by @francoishamon in #901
• Updated Build Guide by @klevzoff in #1332
• Fix Debug-build compile fail on Lassen by @wrtobin in #1337
• Update CO2-brine model documentation by @francoishamon in #1330
• Enable uncrustify for Pangea by @sytuannguyen in #1339
• Fixed bug in the computation of the Peaceman index by @francoishamon in #1341
• Re-enable Doxygen on Travis and fix existing warnings by @klevzoff in #1345
• Update Caliper.rst by @corbett5 in #1346
• Process external components after core components. by @corbett5 in #1347
• Fix VTK output to put plot files under output path by @klevzoff in #1343
• boomerAMG on GPU for SolidMechanicsLagrangianSSLE by @castelletto1 in #1054
• Implemented Dead-Oil model working on device by @francoishamon in #1313
• Adding asyncronous kernel launching and restructuring the CommunicationTools routines to expose more async to allow for latency hiding by @wrtobin in #1319
• update TPLs for Pangea build by @sytuannguyen in #1358
• Kernels for poroelastic solvers by @castelletto1 in #1353
• Implement CO2Brine model on GPU by @francoishamon in #1325
• Small fixes to tutorials. by @CusiniM in #1365
• Changes for Summit. by @corbett5 in #1367
• Fixed debug compilation on Lassen by @francoishamon in #1368
• Removing dead code + tiny cleanings by @TotoGaz in #1373
• Reducing visibility of neighborRank in NeighborCommunicator by @TotoGaz in #1375
• Low order acoustic wave equation by @mndiaye24 in #1269
• Feature/borio/vem refactoring by @andrea-borio in #1288
• Fixed compilation warning with clang+hypreGPU on Lassen by @francoishamon in #1380
• WIP - circular dependencies / object libraries build by @bmhan12 in #1352
• Linear algebra cleanup by @klevzoff in #1363
• Update Caliper.rst by @corbett5 in #1391
• PVTPackage and PAMELA submodule names by @rrsettgast in #1396
• Bugfixes for CUDA build (multiphase model kernel wrappers, HypreVector::extract) by @klevzoff in #1397
• Device Packing Optimization by @wrtobin in #1382
• Update host config to resolve Pangea build issue by @sytuannguyen in #1395
• Fix silo output issue #1186 by @sytuannguyen in #1400
• Bugfix/hypre lai by @castelletto1 in #1403
• Parallel synchronization of new embedded surfaces. by @CusiniM in #1354
• Wrong cast in PTP by @TotoGaz in #1404
• Feature/wellbore mesh, Traction BC, convert {tensor input} by @rrsettgast in #1393
• add missing internal wellbore mesh integrated test baselines by @rrsettgast in #1406
• Adding a script to test for xml attribute coverage by @cssherman in #1102
• Adding timestamp information required by visit to vtk files by @cssherman in #1407
• Add LaplaceBase class by @andrea-borio in #1385
• Add pygeosx_tools python package by @cssherman in #1362
• Triaxial Driver by @joshua-white in #1364
• Cleanup of NeighborCommunicator by @rrsettgast in #1414
• LvArray update. by @corbett5 in #1410
• Changed how the finite element kernel objects are constructed. by @corbett5 in #1340
• DofManager cleanup by @klevzoff in #1412
• Cleanup TractionBoundaryCondition by @klevzoff in #1426
• Corbett/hypre cuda fix by @corbett5 in #1441
• Adds support for hypre-cuda via spack. by @corbett5 in #1445
• Fixed bug in compositional residual norm calculation with multiple regions by @francoishamon in #1458
• Consistify temperature units for CO2-brine input by @francoishamon in https://github.com/GEOSX/GEOSX...

v0.2.0

This release contains many infrastructure improvements and the addition of many basic capabilities.

• Extensive updates to Data Repository
• Discretization
  • Finite element interface
    • Kernel launching interface looping abstraction
    • Element formulations for 1st order:
      • 8-node hexahedron
      • 6-node wedge
      • 5-node pyramid
      • 4-node tetrahedron
  • Cell-centered Finite Volume method with Two-point Flux Approximation (TPFA)
  • Hybrid Finite Volume method with TPFA and quasi-TPFA inner products
• Physics Solvers
  • Solid mechanics explicit on GPU, implicit assembly on GPU
  • Single-phase flow (assembly on GPU)
    • Classical FVM and Hybrid FVM formulations
    • Porous matrix and DFM fracture flow
  • Compositional multiphase flow (assembly on GPU)
    • Fully implicit isothermal overall composition formulation
    • Fluid constitutive models:
      • Equation-of-state hydrocarbon compositional
      • Three-phase extended black-oil
      • Two-phase CO2-brine
  • Multi-segmented wells for single phase and compositional multiphase flow (assembly on GPU)
  • Surface Generation
    • Topology change (legacy GEOS approach)
• Embedded Discrete Fractures
  • Enriched finite element method for the discretization of the mechanics
  • Piecewise constant displacement jump enrichment
  • Hydrofracture solver (legacy GEOS approach)
  • Small strain aligned contact using Lagrange multipliers
    • Discrete fracture model using a low-order stabilized mixed finite element method
  • Proppant Transport Solver
    • FVM formulation
    • Major physical processes modeled:
      • Proppant-fluid slurry flow and multicomponent transport in fractures
      • Proppant gravitational settling
      • Proppant bed build-up and development space
• Mesh Structure
  • Introduced the concept of extrinsic mesh data
  • Fracture elements to represent FV cells in fractures
• VTK output
• Linear algebra interface layers for Hypre, Trilinos, Petsc
  • Common interface for supported linear algebra packages
  • Krylov solvers (CG, GMRES, BiCGSTAB)
  • Preconditioners (algebraic multigrid, incomplete factorizations)
  • Block matrix and vector support
  • Serial and parallel direct solvers