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1. INSaFLU INSaFLU Public

   INSaFLU-TELEVIR: an free web-based (but also locally installable) bioinformatics suite for virus metagenomic detection and routine genomic surveillance

   Python 31 10

2. docker docker Public

   Easy installation for INSaFLU made by docker

   Perl 7 6

3. findONTime findONTime Public

   The findONTime tool runs concurrently with MinION sequencing and merges (at user defined time intervals) the FASTQ files that are being generated in real-time for each sample. It can also automatic…

   Python 3

4. insaflu_docs insaflu_docs Public

   INSaFLU [https://insaflu.insa.pt] DOCUMENTATION

   1 2

5. insaflu_snakemake insaflu_snakemake Public

   Forked from RdrigoE/insaflu_snakemake

   A snakemake implementation of a subset of INSaFLU functionality

   Python 1

6. nextstrain_builds nextstrain_builds Public

   Repository to keep the nextstrain builds used in INSaFLU

   Python