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Sophegrid expansion #482

Merged
merged 17 commits into from
Sep 3, 2024
Merged

Sophegrid expansion #482

merged 17 commits into from
Sep 3, 2024

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HKaras
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@HKaras HKaras commented Aug 29, 2024

Added an option for a closed phi intergral. This has no application directly in deerlab but makes it more universal.

HKaras and others added 15 commits December 5, 2022 15:36
* Increase version number and update changelog (JeschkeLab#455)

* Bugfixes 4th sep (JeschkeLab#460)

* Fix normalisation in rice model

Closes JeschkeLab#459

* Remove three spin anaysis

Closes JeschkeLab#427

* Improved installation instructions

* Caution about difference in definition of cost function

Closes JeschkeLab#450

* Bump Version

* Bug for non linearly constrained problems

When a problem is not linearly constrained and not non-negative, the linear solver outputs a result class not the solution.

* Keeping changelog up-to date

* Fixing Sophgrid bug (JeschkeLab#464)

* Fixing Sophgrid bug

* Add unit test for sophgrid

* Update changelog.rst for new release (JeschkeLab#466)
* Fixing Sophgrid bug

* Add unit test for sophgrid

* Minor doc update

* Bump version Number

* Remove unnecessary doc files

* Update changelog
* Seperate Kinterpolator into its own function

Interpolation in Scipy is very slow, currently the same interpolation is being rerun for every calculation of the dipolarkernal. This is now cached to speed it up.

* Only run orientation selection on grid and integral based kernals

This hunk of code is not needed when fresnel integrals are used so does not need to be evaluated

* Update changelog
* Update for 3.12

* Updated workflows and changelog

* Upload to 3.12
* Update for 3.12

* Updated workflows and changelog

* Upload to 3.12

* Numpy 2.0 compatibility updates

* Update Changelog
* Update for 3.12

* Updated workflows and changelog

* Upload to 3.12

* Fix bug in regparam grid search

Regparam would never build the grid correctly. Now using grid or Brent is automatically determined from number of elements in the regparamrange.

* Add extra error messages

* Update changelog

* Updated Example

* Updated test

The test has been updated. The previous convergence criteria was unreliable and only worked based on a coincidence.

* Prepare For Release

* Remove duplicate python version
@HKaras HKaras requested a review from stestoll August 29, 2024 14:06
@HKaras HKaras self-assigned this Aug 29, 2024
@HKaras HKaras marked this pull request as ready for review August 29, 2024 14:07
@HKaras HKaras added the enhancement New feature or request label Aug 29, 2024
test/test_utils.py Outdated Show resolved Hide resolved
@HKaras HKaras requested a review from stestoll August 30, 2024 09:03
@stestoll stestoll merged commit 4ae181f into JeschkeLab:main Sep 3, 2024
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2 participants