pr oneat

Kapoorlabs-CAPED · Jun 29, 2024 · 51443ed · 51443ed
1 parent b8de0d1
commit 51443ed
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Showing 2 changed files with 5 additions and 6 deletions.
diff --git a/src/oneat/NEATUtils/HolovizNapari.py b/src/oneat/NEATUtils/HolovizNapari.py
@@ -102,7 +102,7 @@ def showNapari(self):
         self.oneat_widget = OneatWidget(
             self.viewer,
             self.csvdir,
-            "Name",
+
             self.key_categories,
             segimagedir=self.segimagedir,
             heatimagedir=self.heatmapimagedir,
@@ -345,8 +345,8 @@ def headlesscall(
                 confidence_locations = []
                 event_locations_dict = {}
                 event_locations_size_dict = {}
-                savename = Path(csvname).stem
-                savename = 'non_maximal_' + savename
+                savename = 'non_maximal_' + Path(csvname).stem
+                savename = os.path.join(csvdir, savename)
                 print(savename)
                 dataset = pd.read_csv(csvname, delimiter=",")
                 # Data is written as T, Y, X, Score, Size, Confidence
@@ -491,8 +491,8 @@ def headlessvolumecall(
                 confidence_locations = []
                 event_locations_dict = {}
                 event_locations_size_dict = {}
-                savename = Path(csvname).stem
-                savename = 'non_maximal_' + savename
+                savename = 'non_maximal_' + Path(csvname).stem
+                savename = os.path.join(csvdir, savename)
                 print(f'performing non maximal supression on {csvname}')
                 dataset = pd.read_csv(csvname, delimiter=",")
                 # Data is written as T, Y, X, Score, Size, Confidence

diff --git a/src/oneat/NEATUtils/oneat_animation/_qt/oneat_widget.py b/src/oneat/NEATUtils/oneat_animation/_qt/oneat_widget.py
@@ -27,7 +27,6 @@ def __init__(
         self,
         viewer: "napari.viewer.Viewer",
         csvdir: str,
-        savename: str,
         key_categories: dict,
         segimagedir: str = None,
         heatimagedir: str = None,