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Preprocessing: Add WSI prefetching #32

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Preprocessing: Add WSI prefetching #32

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FWao
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@FWao FWao commented Jul 19, 2024

When the files containing compressed WSIs are located in network drives, the random accesses to extract tiles might be slow. The preload_wsi option first makes a copy of the WSI file in a temporary local directory and can massively speed up the tile extraction.

Please update your config.yaml file:

preprocessing:
  ...
  preload_wsi: true

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FWao commented Sep 9, 2024

@akutzer Thank you for pointing that out. I propose this version then. Still untested however.

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