Skip to content

A tool for investigating alternative mRNA splicing in next generation mRNA sequence data.

Notifications You must be signed in to change notification settings

MD-Anderson-Bioinformatics/SpliceSeq

Folders and files

NameName
Last commit message
Last commit date

Latest commit

 

History

1 Commit
 
 

Repository files navigation

SpliceSeq - Alternative Splicing Analysis of RNASeq data.

SpliceSeq is an application that aligns RNASeq reads to models of all human genes. The analysis produces splice graphs annotated with read totals and percent-spliced-in (PSI) values for all potential splice events. SpliceSeq can perform comparative analysis between samples or groups of samples to find significant differences in splicing patterns. The results are presented in a dynamic, graphical interface that allows sorting/filtering of splice events and exploration of splicing changes and the impact on protein product.

Documentation

Please see the documentation on the MD Anderson BCB website for instructions on installing and running SpliceSeq.

About

A tool for investigating alternative mRNA splicing in next generation mRNA sequence data.

Resources

Stars

Watchers

Forks

Releases

No releases published

Packages

No packages published