build after minor updates

docs/index.html

@@ -252,7 +252,7 @@ <h1 class="title">Neexdzii Kwah Restoration Planning 2024</h1>
 on behalf of<br />
 Society for Ecosystem Restoration in Northern British Columbia</div></em></p>
 <p class="date"><em><div class="line-block"><br />
-DRAFT Version 0.0.2 2024-03-24</div></em></p>
+DRAFT Version 0.0.2 2024-03-27</div></em></p>
 </div>
 <div id="acknowledgement" class="section level1 front-matter unnumbered hasAnchor">
 <h1>Acknowledgement<a href="index.html#acknowledgement" class="anchor-section" aria-label="Anchor link to header"></a></h1>

docs/recommendations.html

@@ -243,7 +243,7 @@ <h1>
 <h1><span class="header-section-number">5</span> Recommendations<a href="recommendations.html#recommendations" class="anchor-section" aria-label="Anchor link to header"></a></h1>
 <p>Developing comprehensive restoration planning for the Neexdzii Kwah watershed will help ensure that the restoration activities address the underlying drivers of the degradation necessitating restoration. Understanding of the drivers of the degredation will require intensive field assessments, the use of GIS that incorperates all data possible, incorperation of background information and amalgamation of local knowledge. The following recommendations are provided to try to ensure that the restoration activities are effective and address the underlying drivers of the degredation. At the time of writing this can be considered a partial list as the project is still in development and the recommendations are subject to change as the project progresses. The recommendations to date are as follows:</p>
 <ol style="list-style-type: decimal">
-<li><p>Spatially represent past prescriptions in the watershed where information is available. <span class="citation">NCFDC (1998)</span> prescriptions have been extracted from their report and are presented in Table <a href="results.html#tab:tab-ncfdc-1998-pres">4.5</a>. These prescriptions can be loaded into the collaborative GIS project and reviewed collaboratively to understand historic priority ranking, reevaluate the utility of the work 30 years later and help feed into adaptive management where restoration actions were persued.</p></li>
+<li><p>Spatially represent past prescriptions in the watershed where information is available. <span class="citation">NCFDC (1998)</span> prescriptions have been extracted from their report and are presented in Table <a href="results.html#tab:tab-ncfdc-1998-pres">4.7</a>. These prescriptions can be loaded into the collaborative GIS project and reviewed collaboratively to understand historic priority ranking, reevaluate the utility of the work 30 years later and help feed into adaptive management where restoration actions were persued.</p></li>
 <li><p>Spatially represent historic fisheries sites presented in Table <a href="background.html#tab:tab-hist-sites">2.1</a> so the option is available that potential areas of restoration can be ranked according to their proximity to these sites.</p></li>
 <li><p>Spatially delineate areas of high fisheries values based on known spawning and rearing habitat for fish species of interest. Where data gaps exist - develop study plans to understand where this high value habitat is and quantify its value for fish species of interest through standardized methodologies such as Fish and Fish Habitat Assessment Procedures <span class="citation">(Johnston and Slaney 1996)</span>. For known spawning and rearing locations, load reviewed data into <code>bcfishpass</code> using the <code>user_habitat_classification.csv</code> file located <a href="https://github.com/smnorris/bcfishpass/blob/main/data/user_habitat_classification.csv">here</a>. Information can then be pulled into the collaborative GIS project and queried to facilitate priority ranking of areas of high fisheries values.</p></li>
 <li><p>Acquire, georeference, archive (within SKT) and analyze historic aerial imagery for the Neexdzii Kwah watershed and compare with recent orthoimagery and/or LiDAR data to quantify historic changes in stream morphology resulting in loss of quantity and quality of water and fish habitat while highlighting areas of historic dredging, realignment, and floodplain disconnections due to infrastructure, to guide future restoration efforts. Script all analysis when possible to facilitate reproducibility and sharing of the analysis.</p></li>

docs/reference-keys.txt

@@ -18,6 +18,7 @@ fig:all-benefits
 tab:kable-resources
 tab:tab-memos
 tab:tab-rfp-tracking
+tab:tab-sites-restoration-gpkg-tracking
 tab:tab-ncfdc-1998-priority
 tab:tab-ncfdc-1998-pres
 tab:tab-gis-params

docs/references.html

@@ -279,6 +279,9 @@ <h1>References<a href="references.html#references" class="anchor-section" aria-l
 ———. 2019. <span>“Freshwater <span>Fishing Regulations Synopsis</span>.”</span> Ministry of Forests, Lands, Natural Resource Operations &amp; Rural Development (FLNRORD).
 </div>
 <div class="csl-entry">
+Gaboury, M. N., and J. J. Smith. 2016. <span>“Development <span>Of Aquatic Restoration Designs And On-Farm Cattle Management Improvements</span> Within the <span>Wet</span>’suwet’en <span>First Nation Territory</span>.”</span> Prepared by: Wet’suwet’en First Nation, Yinka Dene Economic Development Limited Partnership Inc.; LGL Ltd. Prepared for: Fish Habitat Restoration Initiative Fishieries; Oceans Canada Ecosytem Management Branch.
+</div>
+<div class="csl-entry">
 Gottesfeld, Allen, Ken Rabnett, and Peter Hall. 2002. <span>“Conserving <span>Skeena Fish Populations</span> and <span>Their Habitat</span> - <span class="nocase">Skeena Stage I Watershed-based Fish Sustainability Plan</span>.”</span> Skeena Fisheries Commission.
 </div>
 <div class="csl-entry">
@@ -312,7 +315,7 @@ <h1>References<a href="references.html#references" class="anchor-section" aria-l
 MoE. 2019. <span>“Known <span>BC</span> Fish Observations and <span>BC</span> Fish Distributions.”</span> Ministry of Environment and Climate Change Strategy - Knowledge Management.
 </div>
 <div class="csl-entry">
-NCFDC. 1998. <span>“Mid-Bulkley Detailed Fish Habitat/Riparian/Channel Assessment for Watershed Restoration.”</span> <a href="http://a100.gov.bc.ca/appsdata/acat/documents/r8931/Mid-BulkleyDetailedFishHabitatRiparian.ChannelAss_1169052197910_e76ab8bf05ee4953b589da961b220f69.pdf">http://a100.gov.bc.ca/appsdata/acat/documents/r8931/Mid-BulkleyDetailedFishHabitatRiparian.ChannelAss_1169052197910_e76ab8bf05ee4953b589da961b220f69.pdf</a>.
+NCFDC. 1998. <span>“Mid-<span>Bulkley Detailed Fish Habitat</span>/<span>Riparian</span>/<span>Channel Assessment</span> for <span>Watershed Restoration</span>.”</span> Nadina Community Futures Development Corporation (NCFDC). <a href="http://a100.gov.bc.ca/appsdata/acat/documents/r8931/Mid-BulkleyDetailedFishHabitatRiparian.ChannelAss_1169052197910_e76ab8bf05ee4953b589da961b220f69.pdf">http://a100.gov.bc.ca/appsdata/acat/documents/r8931/Mid-BulkleyDetailedFishHabitatRiparian.ChannelAss_1169052197910_e76ab8bf05ee4953b589da961b220f69.pdf</a>.
 </div>
 <div class="csl-entry">
 Norris, Simon. 2024. <span>“Smnorris/Bcfishpass.”</span>
@@ -351,12 +354,12 @@ <h1>References<a href="references.html#references" class="anchor-section" aria-l
 Wilson, Tim, and Ken Rabnett. 2007. <span>“Fish <span>Passage Assessment</span> of <span>Highway</span> 16 and <span>CN Rail</span> in the <span>Bulkley Watershed</span>,”</span> 124.
 </div>
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-<div class="sourceCode" id="cb44"><pre class="sourceCode r"><code class="sourceCode r"><span id="cb44-1"><a href="references.html#cb44-1" tabindex="-1"></a><span class="co">#https://github.com/rstudio/bookdown/issues/8 how to put the references wherever we want.</span></span>
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+<div class="sourceCode" id="cb45"><pre class="sourceCode r"><code class="sourceCode r"><span id="cb45-1"><a href="references.html#cb45-1" tabindex="-1"></a><span class="co">#https://github.com/rstudio/bookdown/issues/8 how to put the references wherever we want.</span></span>
+<span id="cb45-2"><a href="references.html#cb45-2" tabindex="-1"></a></span>
+<span id="cb45-3"><a href="references.html#cb45-3" tabindex="-1"></a><span class="co"># `r if (knitr::is_html_output()){ &#39;</span></span>
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+<span id="cb45-6"><a href="references.html#cb45-6" tabindex="-1"></a><span class="co"># &#39;}`</span></span></code></pre></div>
 
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