Report from 2.1.1

Plant-Food-Research-Open · Sep 19, 2024 · 036fa66 · 036fa66
1 parent 37e44cc
commit 036fa66
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Showing 2 changed files with 7 additions and 4 deletions.
diff --git a/.gitignore b/.gitignore
@@ -6,8 +6,11 @@ results/
 testing/
 testing*
 *.pyc
-__pycache__/
 
 # PFR files
 *.stdout
 *.stderr
+
+# nf-test files
+.nf-test/
+.nf-test.log
diff --git a/index.html b/index.html
@@ -640,7 +640,7 @@
 <body>
   <div class="report-header-wrapper">
     <div class="report-header">
-      AssemblyQC v2.1.0
+      AssemblyQC v2.1.1
     </div>
   </div>
   <div class="tab" id="topNavBarButtons">
@@ -732,7 +732,7 @@
         </div>
         <div class="section-para-wrapper"><p class="section-para">Only displaying parameters that differ from the pipeline defaults.</p></div>
         <div class="highlight"><pre><span></span><span class="p">{</span>
-<span class="w">    </span><span class="nt">&quot;runName&quot;</span><span class="p">:</span><span class="w"> </span><span class="s2">&quot;pedantic_cray&quot;</span><span class="p">,</span>
+<span class="w">    </span><span class="nt">&quot;runName&quot;</span><span class="p">:</span><span class="w"> </span><span class="s2">&quot;infallible_meninsky&quot;</span><span class="p">,</span>
 <span class="w">    </span><span class="nt">&quot;containerEngine&quot;</span><span class="p">:</span><span class="w"> </span><span class="s2">&quot;apptainer&quot;</span><span class="p">,</span>
 <span class="w">    </span><span class="nt">&quot;launchDir&quot;</span><span class="p">:</span><span class="w"> </span><span class="s2">&quot;/powerplant/workspace/hrauxr/assemblyqc&quot;</span><span class="p">,</span>
 <span class="w">    </span><span class="nt">&quot;workDir&quot;</span><span class="p">:</span><span class="w"> </span><span class="s2">&quot;/powerplant/workspace/hrauxr/assemblyqc/work&quot;</span><span class="p">,</span>
@@ -808,7 +808,7 @@
 <span class="w">    </span><span class="nt">&quot;pandas&quot;</span><span class="p">:</span><span class="w"> </span><span class="s2">&quot;2.1.1&quot;</span><span class="p">,</span>
 <span class="w">    </span><span class="nt">&quot;perl&quot;</span><span class="p">:</span><span class="w"> </span><span class="s2">&quot;5.32.1&quot;</span><span class="p">,</span>
 <span class="w">    </span><span class="nt">&quot;pigz&quot;</span><span class="p">:</span><span class="w"> </span><span class="mf">2.6</span><span class="p">,</span>
-<span class="w">    </span><span class="nt">&quot;plant-food-research-open/assemblyqc&quot;</span><span class="p">:</span><span class="w"> </span><span class="s2">&quot;v2.1.0&quot;</span><span class="p">,</span>
+<span class="w">    </span><span class="nt">&quot;plant-food-research-open/assemblyqc&quot;</span><span class="p">:</span><span class="w"> </span><span class="s2">&quot;v2.1.1&quot;</span><span class="p">,</span>
 <span class="w">    </span><span class="nt">&quot;plotly&quot;</span><span class="p">:</span><span class="w"> </span><span class="s2">&quot;5.20.0&quot;</span><span class="p">,</span>
 <span class="w">    </span><span class="nt">&quot;plotsr&quot;</span><span class="p">:</span><span class="w"> </span><span class="s2">&quot;1.1.1&quot;</span><span class="p">,</span>
 <span class="w">    </span><span class="nt">&quot;py_fasta_validator&quot;</span><span class="p">:</span><span class="w"> </span><span class="mf">0.6</span><span class="p">,</span>