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SYNY-v1.0a
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@Pombert-JF Pombert-JF released this 03 May 13:22
· 137 commits to main since this release
1.0a
548b5b3
Changes:
  • Added --hfsize , --hmin, --hmax and --hauto options to heatmaps
  • Added more options to the Circos --labels command line switch. Possible values are now: mixed, roman, arabic and names
  • Added --pthreads option to set the limit of plotting instances to run in parallel (in case each plot eats up too much RAM); defaults to the value set by --threads if omitted.
  • Added SVG output to paf_metrics.py
  • Set fonts as editable in SVG output files
  • Removed unnecessary border frames from barplots
  • Fixed ambiguous heatmap titles
  • Added an example script (Arabidopsis.sh) in Examples/ to download two Arabidopsis genomes (~ 100-150 Mbp each) for testing purposes
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