Docker images providing RStudio Server and the R package ‘Luminescence’
| Image | Subfolder | Size | Build type | Metrics | Run image |
|---|---|---|---|---|---|
| rlum/core | core |  |
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docker run -d -p 8787:8787 -e PASSWORD=yourpassword rlum/core |
| rlum/stable | stable |  |
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docker run -d -p 8787:8787 -e PASSWORD=yourpassword rlum/stable |
| rlum/dev | dev |  |
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docker run -d -p 8787:8787 -e PASSWORD=yourpassword rlum/dev |
| rlum/archive | archive |  |
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docker run -d -p 8787:8787 -e PASSWORD=yourpassword rlum/archive:<version> |
| rlum/drac | drac |  |
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docker run -d -p 80:80 rlum/drac:<version> |
The base image rlum/core builds on top of rocker/rstudio:latest
(see the ‘rocker’-project by D. Eddelbuettel and C.
Boettiger) with additional
installs of:
- JAGS
- rgl
- devtools
- ggplot2
- tidyverse
- rmarkdown
rlum/stable contains the following packages currently available on
CRAN:
- Luminescence
- RLumModel
- RLumShiny
rlum/dev installs the latest development versions of these packages
via devtools::install_github() from the following repositories:
- <R-Lum/Luminescence@dev_x.x.x>
- <R-Lum/RLumModel@dev_x.x>
- tzerk/RLumShiny@master
rlum/archive provides static Docker images for each release version of
the R package ‘Luminescence’. See the table below for all available
images.
This repository also includes Dockerfiles to create docker images
running an Apache server with PHP 7.0
that hosts DRAC.
Pre-made images are available
here and can be run using docker run -d -p 80:80 rlum/drac:<version> (replace <version> with any of
the tags listed here). Once
the container has been started open your browser and open
http://localhost/.
Install docker
Please follow one of the following guides depending on your OS:
Run container
First, make sure that Docker has been successfully installed and that the Docker service is running. In your preferred command-line interface (bash, CMD, powershell, …) type in:
docker run -d -p 8787:8787 -e PASSWORD=yourpassword rlum/stable:latest
This command will automatically download (only once) and run the docker
image that includes RStudio with the R packages ‘Luminescence’,
‘RLumModel’ and ‘RLumShiny’ pre-installed. The -d (or --detach)
flag tells Docker to run the container in the background. With
-p 8787:8787 we further specify the port on which RStudio Server
listens to and with -e PASSWORD=yourpassword we set a password for the
user RStudio (required). The service should start immediately. The
RStudio interface is then available on http://localhost:8787.
rlum/stable:latest refers to the username (rlum), repository
(stable) and image tag (latest). If you want to use an older version
of ‘Luminescence’ located in the archive repository use
e.g. rlum/archive:0.4.4.
Stop container
Copy and run the following line in the shell (this does not work in windows CMD!):
docker stop $(docker ps -a -q)
| Version | Size | Pull image | Run image |
|---|---|---|---|
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docker pull rlum/archive:0.1.7 |
docker run -d -p 8787:8787 -e PASSWORD=yourpassword rlum/archive:0.1.7 |
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docker pull rlum/archive:0.1.8 |
docker run -d -p 8787:8787 -e PASSWORD=yourpassword rlum/archive:0.1.8 |
| Version | Size | Pull image | Run image |
|---|---|---|---|
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docker pull rlum/archive:0.2.0 |
docker run -d -p 8787:8787 -e PASSWORD=yourpassword rlum/archive:0.2.0 |
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docker pull rlum/archive:0.2.1 |
docker run -d -p 8787:8787 -e PASSWORD=yourpassword rlum/archive:0.2.1 |
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docker pull rlum/archive:0.2.2 |
docker run -d -p 8787:8787 -e PASSWORD=yourpassword rlum/archive:0.2.2 |
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docker pull rlum/archive:0.2.3 |
docker run -d -p 8787:8787 -e PASSWORD=yourpassword rlum/archive:0.2.3 |
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docker pull rlum/archive:0.2.4 |
docker run -d -p 8787:8787 -e PASSWORD=yourpassword rlum/archive:0.2.4 |
| Version | Size | Pull image | Run image |
|---|---|---|---|
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docker pull rlum/archive:0.3.0 |
docker run -d -p 8787:8787 -e PASSWORD=yourpassword rlum/archive:0.3.0 |
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docker pull rlum/archive:0.3.1 |
docker run -d -p 8787:8787 -e PASSWORD=yourpassword rlum/archive:0.3.1 |
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docker pull rlum/archive:0.3.2 |
docker run -d -p 8787:8787 -e PASSWORD=yourpassword rlum/archive:0.3.2 |
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docker pull rlum/archive:0.3.3 |
docker run -d -p 8787:8787 -e PASSWORD=yourpassword rlum/archive:0.3.3 |
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docker pull rlum/archive:0.3.4 |
docker run -d -p 8787:8787 -e PASSWORD=yourpassword rlum/archive:0.3.4 |
| Version | Size | Pull image | Run image |
|---|---|---|---|
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docker pull rlum/archive:0.4.0 |
docker run -d -p 8787:8787 -e PASSWORD=yourpassword rlum/archive:0.4.0 |
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docker pull rlum/archive:0.4.1 |
docker run -d -p 8787:8787 -e PASSWORD=yourpassword rlum/archive:0.4.1 |
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docker pull rlum/archive:0.4.2 |
docker run -d -p 8787:8787 -e PASSWORD=yourpassword rlum/archive:0.4.2 |
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docker pull rlum/archive:0.4.3 |
docker run -d -p 8787:8787 -e PASSWORD=yourpassword rlum/archive:0.4.3 |
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docker pull rlum/archive:0.4.4 |
docker run -d -p 8787:8787 -e PASSWORD=yourpassword rlum/archive:0.4.4 |
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docker pull rlum/archive:0.4.5 |
docker run -d -p 8787:8787 -e PASSWORD=yourpassword rlum/archive:0.4.5 |
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docker pull rlum/archive:0.4.6 |
docker run -d -p 8787:8787 -e PASSWORD=yourpassword rlum/archive:0.4.6 |
| Version | Size | Pull image | Run image |
|---|---|---|---|
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docker pull rlum/archive:0.5.0 |
docker run -d -p 8787:8787 -e PASSWORD=yourpassword rlum/archive:0.5.0 |
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docker pull rlum/archive:0.5.1 |
docker run -d -p 8787:8787 -e PASSWORD=yourpassword rlum/archive:0.5.1 |
| Version | Size | Pull image | Run image |
|---|---|---|---|
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docker pull rlum/archive:0.6.0 |
docker run -d -p 8787:8787 -e PASSWORD=yourpassword rlum/archive:0.6.0 |
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docker pull rlum/archive:0.6.1 |
docker run -d -p 8787:8787 -e PASSWORD=yourpassword rlum/archive:0.6.1 |
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docker pull rlum/archive:0.6.2 |
docker run -d -p 8787:8787 -e PASSWORD=yourpassword rlum/archive:0.6.2 |
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docker pull rlum/archive:0.6.4 |
docker run -d -p 8787:8787 -e PASSWORD=yourpassword rlum/archive:0.6.4 |
| Version | Size | Pull image | Run image |
|---|---|---|---|
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docker pull rlum/archive:0.7.0 |
docker run -d -p 8787:8787 -e PASSWORD=yourpassword rlum/archive:0.7.0 |
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docker pull rlum/archive:0.7.3 |
docker run -d -p 8787:8787 -e PASSWORD=yourpassword rlum/archive:0.7.3 |
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docker pull rlum/archive:0.7.4 |
docker run -d -p 8787:8787 -e PASSWORD=yourpassword rlum/archive:0.7.4 |
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docker pull rlum/archive:0.7.5 |
docker run -d -p 8787:8787 -e PASSWORD=yourpassword rlum/archive:0.7.5 |
| Version | Size | Pull image | Run image |
|---|---|---|---|
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docker pull rlum/archive:0.8.2 |
docker run -d -p 8787:8787 -e PASSWORD=yourpassword rlum/archive:0.8.2 |
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docker pull rlum/archive:0.8.3 |
docker run -d -p 8787:8787 -e PASSWORD=yourpassword rlum/archive:0.8.3 |
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docker pull rlum/archive:0.8.4 |
docker run -d -p 8787:8787 -e PASSWORD=yourpassword rlum/archive:0.8.4 |
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docker pull rlum/archive:0.8.5 |
docker run -d -p 8787:8787 -e PASSWORD=yourpassword rlum/archive:0.8.5 |
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docker pull rlum/archive:0.8.6 |
docker run -d -p 8787:8787 -e PASSWORD=yourpassword rlum/archive:0.8.6 |