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This repository has been archived by the owner on Nov 16, 2023. It is now read-only.

Releases: RangeShifter/RangeShiftR-package

Malchow et al. (2024) - SI

15 Nov 21:58
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RangeShiftR // Full R input

This is a development version of RangeShiftR

It is published here as supplementary material to the publication

"Fitting individual-based models of spatial population dynamics to long-term monitoring data"

by Anne-Kathleen Malchow, Guillermo Fandos, Urs G. Kormann, Martin U. Grüebler, Marc Kéry, Florian Hartig, Damaris Zurell.

This version can run without any file inputs or outputs and instead takes input maps as matrices from R.
Inputs such as habitat maps can now be given as matrices in R and the output abundance maps are (optionally) returned as raster objects.
(Note: the output type that is stored in these return rasters is currently hard-coded and is here set to the number of adult individuals in each cell. Adults are all stages with strictly positive fecundity.)
Avoiding the file connection saves runtime and facilitates thread safety as needed for parallel code execution.
Further, a new feature allows all demographic rates to vary spatially and temporally.

Malchow et al. (2022) - SI

21 Sep 21:12
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RangeShiftR // Spatial demography

This is a development version of RangeShiftR

It contains a new feature that allows all demographic rates to vary spatially and temporally.

It is published here as supplementary material to the publication:

"Demography-environment relationships improve mechanistic understanding of range dynamics under climate change"

by Anne-Kathleen Malchow, Florian Hartig, Jette Reeg, Marc Kéry, and Damaris Zurell.

RangeShiftR v1.0.3

04 Aug 13:53
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This is the R package RangeShiftR v1.0.3. It makes the software RangeShifter v2.0.2 available for the platform R.

The RangeShifter v2.0.2 Windows executable, which offers both a batch mode and a graphical user interface (GUI), as well as accompanying documentation, can be found the the tagged repository "RangeShifter executable v2.0.2".
If you would like to compile the command line version yourself (works on Windows as well as Unix-based systems), you can find the source code in the repository "RangeShifter batch code v2.0.2".