Various edits throughout

paper/sea-comp/.gitignore

@@ -0,0 +1,10 @@
+*.log
+*.aux
+*.bbl
+*.blg
+*.fdb_latexmk
+*.fls
+*.out
+*.synctex.gz
+paper.pdf
+paper-neuro.pdf

paper/sea-neuro/.gitignore

@@ -0,0 +1,10 @@
+*.log
+*.aux
+*.bbl
+*.blg
+*.fdb_latexmk
+*.fls
+*.out
+*.synctex.gz
+paper.pdf
+paper-neuro.pdf

paper/sea-neuro/biblio.bib

@@ -1,3 +1,42 @@
+@article{hayot2022sea,
+  title={Sea: A lightweight data-placement library for Big Data scientific computing},
+  author={Hayot-Sasson, Val{\'e}rie and Dugr{\'e}, Mathieu and Glatard, Tristan},
+  journal={arXiv preprint arXiv:2207.01737},
+  year={2022}
+}
+
+@article{gorgolewski2016brain,
+  title={The brain imaging data structure, a format for organizing and describing outputs of neuroimaging experiments},
+  author={Gorgolewski, Krzysztof J and Auer, Tibor and Calhoun, Vince D and Craddock, R Cameron and Das, Samir and Duff, Eugene P and Flandin, Guillaume and Ghosh, Satrajit S and Glatard, Tristan and Halchenko, Yaroslav O and others},
+  journal={Scientific data},
+  volume={3},
+  number={1},
+  pages={1--9},
+  year={2016},
+  publisher={Nature Publishing Group}
+}
+
+@article{henschel2020fastsurfer,
+  title={Fastsurfer-a fast and accurate deep learning based neuroimaging pipeline},
+  author={Henschel, Leonie and Conjeti, Sailesh and Estrada, Santiago and Diers, Kersten and Fischl, Bruce and Reuter, Martin},
+  journal={NeuroImage},
+  volume={219},
+  pages={117012},
+  year={2020},
+  publisher={Elsevier}
+}
+
+@article{hoffmann2021synthmorph,
+  title={SynthMorph: learning contrast-invariant registration without acquired images},
+  author={Hoffmann, Malte and Billot, Benjamin and Greve, Douglas N and Iglesias, Juan Eugenio and Fischl, Bruce and Dalca, Adrian V},
+  journal={IEEE transactions on medical imaging},
+  volume={41},
+  number={3},
+  pages={543--558},
+  year={2021},
+  publisher={IEEE}
+}
+
 @article{HCP,
   title     = {{The WU-Minn Human Connectome Project: an overview}},
   author    = {Van Essen, David C and Smith, Stephen M and Barch, Deanna M and others},
@@ -38,7 +77,7 @@ @inproceedings{rocklin2015dask
   organization = {Citeseer}
 }
 
-@article{rokem2021pan,
+@misc{rokem2021pan,
   title     = {Pan-neuro: interactive computing at scale with BRAIN datasets},
   author    = {Rokem, Ariel and Dichter, Ben and Holdgraf, Christopher and Ghosh, Satrajit},
   year      = {2021},
@@ -171,8 +210,7 @@ @article{xtreemfs
   year    = {2007}
 }
 
-
-@dataset{ds001545,
+@misc{ds001545,
   author    = {Aly, M. and Chen, J. and Turk-Browne, N.B. and Hasson, U.},
   title     = {"Learning Naturalistic Temporal Structure in the Posterior Medial Network"},
   year      = {2019},
@@ -230,4 +268,4 @@ @article{haitas2021age
   pages     = {e0249948},
   year      = {2021},
   publisher = {Public Library of Science San Francisco, CA USA}
-}
+}