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Generalized masking #1092

Merged
merged 21 commits into from
Apr 25, 2024
Merged

Generalized masking #1092

merged 21 commits into from
Apr 25, 2024

Commits on Dec 4, 2023

  1. init

    @camisowers
    camisowers committed Dec 4, 2023
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Commits on Dec 5, 2023

  1. tests

    @camisowers
    camisowers committed Dec 5, 2023
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  2. notebook

    @camisowers
    camisowers committed Dec 5, 2023
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Commits on Dec 14, 2023

  1. Merge branch 'main' into signal_masking

    @camisowers
    camisowers committed Dec 14, 2023
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Commits on Apr 16, 2024

  1. use ez_seg.composite.composite_builder

    @camisowers
    camisowers committed Apr 16, 2024
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  2. Merge branch 'main' into signal_masking

    @camisowers
    camisowers authored Apr 16, 2024
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  3. fix composite_dir if statement

    @camisowers
    camisowers committed Apr 16, 2024
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  4. Merge remote-tracking branch 'origin/signal_masking' into signal_masking

    @camisowers
    camisowers committed Apr 16, 2024
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  5. use _create_object_mask instead of create_mask

    @camisowers
    camisowers committed Apr 16, 2024
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  6. remove squidpy requirement

    @camisowers
    camisowers committed Apr 16, 2024
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  7. remove dask dependecy

    @camisowers
    camisowers committed Apr 16, 2024
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  8. pycodestyle

    @camisowers
    camisowers committed Apr 16, 2024
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  9. notebook updates

    @camisowers
    camisowers committed Apr 16, 2024
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  10. notebook tweaks

    @camisowers
    camisowers committed Apr 16, 2024
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Commits on Apr 18, 2024

  1. feedback tweaks

    @camisowers
    camisowers committed Apr 18, 2024
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  2. feedback tweaks II

    @camisowers
    camisowers committed Apr 18, 2024
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Commits on Apr 24, 2024

  1. pin torchdata

    @camisowers
    camisowers committed Apr 24, 2024
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  2. pin pytorch

    @camisowers
    camisowers committed Apr 24, 2024
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  3. remove pytorch pin

    @camisowers
    camisowers committed Apr 24, 2024
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Commits on Apr 25, 2024

  1. Test with torch==2.2.0, this worked with Kausi

    @alex-l-kong
    alex-l-kong committed Apr 25, 2024
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  2. Handle case where composite_directory needs explicit conversion to pa… 

    …thlib.Path if of type str
    @alex-l-kong
    alex-l-kong committed Apr 25, 2024
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