fix again #4
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| name: ci | ||
| on: | ||
| push: | ||
| branches: | ||
| - "main" | ||
| pull_request: | ||
| branches: | ||
| - "main" | ||
| schedule: | ||
| # Nightly tests run on main by default: | ||
| # Scheduled workflows run on the latest commit on the default or base branch. | ||
| # (from https://help.github.com/en/actions/reference/events-that-trigger-workflows#scheduled-events-schedule) | ||
| - cron: "0 0 * * *" | ||
| workflow_dispatch: | ||
| merge_group: | ||
| concurrency: | ||
| group: "${{ github.workflow }}-${{ github.ref }}" | ||
| cancel-in-progress: true | ||
| defaults: | ||
| run: | ||
| shell: bash -l {0} | ||
| jobs: | ||
| env: | ||
| OE_LICENSE: ${{ github.workspace }}/.OpenEye/oe_license.txt | ||
| build: | ||
| runs-on: ubuntu-latest | ||
| steps: | ||
| - name: Checkout code | ||
| uses: actions/checkout@v2 | ||
| - name: Install docker-compose | ||
| run: | | ||
| sudo apt-get update | ||
| sudo apt-get install -y docker-compose | ||
| - name: Copy example env file | ||
| run: | | ||
| cp devtools/deployment/.env.example .env | ||
| - name: Make .OpenEye directory | ||
| run: | | ||
| mkdir -p ${{ github.workspace }}/.OpenEye | ||
| - name: Test OE License & Write License to File | ||
| env: | ||
| OE_LICENSE_TEXT: ${{ secrets.OE_LICENSE }} | ||
| run: | | ||
| echo "${OE_LICENSE_TEXT}" > ${OE_LICENSE} | ||
| python -c "import openeye; assert openeye.oechem.OEChemIsLicensed(), 'OpenEye license checks failed!'" | ||
| - name: Build and run containers | ||
| run: | | ||
| docker-compose -f docker-compose-dev.yml up -d | ||
| - name: Run tests | ||
| run: | | ||
| docker-compose -f docker-compose-dev.yml exec web bash -c " cd argos && /opt/conda/bin/python manage.py test" | ||
