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@bcm-uga

Mathematical and Computational Biology Research Group

Team of Mathematical and Computational Biology at Univ Grenoble Alpes (France).

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  1. pcadapt pcadapt Public

    Performing highly efficient genome scans for local adaptation with R package pcadapt v4

    R 39 10

  2. Loter Loter Public

    A software package for local ancestry inference and haplotype phasing

    C++ 39 7

  3. TESS3_encho_sen TESS3_encho_sen Public

    TESS3 is a fast and efficient program for estimating spatial population structure based on geographically constrained non-negative matrix factorization and population genetics.

    R 19 6

  4. SSMPG2017 SSMPG2017 Public

    Repository for the Data challenge about Software and Statistical Methods for Population Genetics (SSMPG 2017)

    HTML 14 13

  5. lfmm lfmm Public

    Fitting latent factor mixed models

    R 12

  6. LEA LEA Public

    C 9 7

Repositories

Showing 10 of 33 repositories
  • gedepir Public

    Gene Expression DEconvolution PIpeline in R

    bcm-uga/gedepir’s past year of commit activity
    HTML 1 0 0 0 Updated Dec 11, 2024
  • hadaca3 Public
    bcm-uga/hadaca3’s past year of commit activity
    R 1 2 20 0 Updated Dec 10, 2024
  • LEA Public
    bcm-uga/LEA’s past year of commit activity
    C 9 7 0 0 Updated Nov 8, 2024
  • bcm-uga/DeconvBenchmark’s past year of commit activity
    R 0 MIT 0 0 0 Updated Nov 8, 2024
  • hdmax2 Public

    High dimensional mediation analysis with max-squared tests

    bcm-uga/hdmax2’s past year of commit activity
    R 0 GPL-3.0 1 0 0 Updated Oct 25, 2024
  • pcadapt Public

    Performing highly efficient genome scans for local adaptation with R package pcadapt v4

    bcm-uga/pcadapt’s past year of commit activity
    R 39 10 6 0 Updated Sep 24, 2024
  • geneticgap Public

    Repository related to "A quantitative theory for genomic offset statistics"

    bcm-uga/geneticgap’s past year of commit activity
    HTML 4 0 0 0 Updated Jun 12, 2024
  • penda Public

    PenDA is a rank-based method for personalized differential analysis.

    bcm-uga/penda’s past year of commit activity
    R 7 4 0 0 Updated Mar 27, 2024
  • tuto-ssh Public

    How to work on BCM servers (krakenator, luxor) from home?

    bcm-uga/tuto-ssh’s past year of commit activity
    2 0 0 0 Updated Jan 31, 2024
  • dmprocr Public

    An R package that performs differential methylation profiles clustering.

    bcm-uga/dmprocr’s past year of commit activity
    R 0 2 0 0 Updated Jul 6, 2023

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