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biocorecrg · Nov 1, 2024 · 0f76808 · 0f76808
1 parent 2626fe9
commit 0f76808
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Showing 2 changed files with 7 additions and 1 deletion.
diff --git a/modules/local/exorthist/split_clusters_species.nf b/modules/local/exorthist/split_clusters_species.nf
@@ -1,6 +1,5 @@
 process SPLIT_CLUSTERS_BY_SPECIES_PAIRS {
     tag { clusterfile.name }
-    publishDir "${params.output}/", mode: 'copy', pattern: "gene_cluster_file.gz"
 
     input:
     path clusterfile

diff --git a/nextflow.config b/nextflow.config
@@ -210,6 +210,13 @@ process {
         mode: params.publish_dir_mode
       ]
   }
+  withName: 'SPLIT_CLUSTERS_BY_SPECIES_PAIRS' {
+    publishDir = [
+      path: { "${params.output}" },
+      mode: params.publish_dir_mode,
+      pattern: "gene_cluster_file.gz"
+    ]
+  }
   withLabel: 'publish' {
     publishDir = [
          path: { "${params.output}" },