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@biomicrodev

Laboratory for Bio-Micro Devices [Jonas Lab] @ BWH

Implantable microdevices for precision medicine.

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  1. picasso picasso Public

    Linear spectral unmixing

    Jupyter Notebook 2 1

  2. broadside-stitch broadside-stitch Public archive

    Python 1 1

  3. antilles antilles Public archive

    Wedge-picking in histology images.

    Python

  4. jonaslab-cpp jonaslab-cpp Public

    Some CellProfiler plugins.

    Python

  5. napari-raman napari-raman Public

    A simple Raman spectra viewer using napari

    Python

  6. pybasic pybasic Public

    Background and shading correction for microscopy images

    Jupyter Notebook

Repositories

Showing 10 of 12 repositories
  • qupath Public Forked from qupath/qupath

    QuPath - Bioimage analysis & digital pathology (Jonas lab fork)

    biomicrodev/qupath’s past year of commit activity
    Java 0 GPL-3.0 286 0 0 Updated Jul 25, 2024
  • napari Public Forked from napari/napari

    napari: a fast, interactive, multi-dimensional image viewer for python

    biomicrodev/napari’s past year of commit activity
    Python 0 BSD-3-Clause 426 0 0 Updated May 14, 2024
  • broadside-cycif-annotate-unmix Public
    biomicrodev/broadside-cycif-annotate-unmix’s past year of commit activity
    Python 0 MIT 1 0 0 Updated May 4, 2023
  • broadside-cycif-stitch Public
    biomicrodev/broadside-cycif-stitch’s past year of commit activity
    Python 0 MIT 1 0 0 Updated May 2, 2023
  • pybasic Public

    Background and shading correction for microscopy images

    biomicrodev/pybasic’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated May 2, 2023
  • picasso Public

    Linear spectral unmixing

    biomicrodev/picasso’s past year of commit activity
    Jupyter Notebook 2 MIT 1 0 0 Updated Apr 10, 2023
  • broadside-stitch Public archive
    biomicrodev/broadside-stitch’s past year of commit activity
    Python 1 MIT 1 0 0 Updated Apr 3, 2023
  • bmd-perf Public

    Simple performance logging

    biomicrodev/bmd-perf’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Mar 10, 2023
  • broadside Public

    Image processing pipelines

    biomicrodev/broadside’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Dec 2, 2022
  • napari-raman Public

    A simple Raman spectra viewer using napari

    biomicrodev/napari-raman’s past year of commit activity
    Python 0 BSD-3-Clause 0 0 0 Updated Aug 30, 2022
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